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[+] Show/hide bicluster #42 rows and columns.
bicluster 42
Phaeodactylum tricornutum
44x53
[+] Show/hide bicluster #42 rows (genes).
bicluster 42 genes
Phaeodactylum tricornutum
44
[+] Show/hide bicluster #42 rows (short gene names).
bicluster 42 short names
Phaeodactylum tricornutum
44
short_name
[+] Show/hide bicluster #42 rows (long gene names).
bicluster 42 long names
Phaeodactylum tricornutum
44
long_name
[+] Show/hide bicluster #42 rows (NCBI RefSeq gene IDs).
bicluster 42 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #42 gene upstream sequences.
bicluster 42 upstream sequences
Phaeodactylum tricornutum
44
upstream
[+] Show/hide bicluster #42 columns (arrays; conditions).
bicluster 42 arrays
Phaeodactylum tricornutum
53
[+] Show/hide bicluster #42 ratios.
bicluster 42 ratios
Phaeodactylum tricornutum
44x53
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_2 GSE17237_highlight_12hr_3 GSE17237_highlight_3hr_2 GSE17237_highlight_48hr_1 GSE31131_Cadmium_0.12mg_2 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_5 GSE34988_Cadmium_2 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Dispersant_5 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_5 GSE34988_Silver_1 GSE34988_Silver_3 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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50635 -0.0115060744821395 -0.0296316067456719 0.657947619201954 0.137518925413447 0.46455005088767 0.413057535195843 0.251761140551572 -1.80608873852299 -1.28064277086018 -1.68532819862975 -1.66538304157697 -0.60398508996076 -0.181278934211642 0.184037904475292 -0.441515243891497 -1.22119452359849 -1.46495358555698 -1.14267990984879 0.0946539114802981 0.282100363238375 -2.7249685520892 -2.7055596698964 -2.75253085266115 -1.3643879773574 -1.33467211133712 0.131596754948424 0.0464845954119484 0.229498211334392 0.834110901387998 0.634176782887288 0.64077102107517 1.38781152778042 1.19856824926678 2.08844542418354 1.73570190049613 1.95663281433967 1.88688977814211 1.15244978681063 0.921083869166452 0.266642110254585 0.0133063827219002 1.200571720681 0.749081229495217 -1.4700996649343 -1.50403744096906 -1.35605050845435 -1.86301624124008 -1.96175368436757 -0.22906381568852 0.207875934518011 0.309579787046508 0.21786561388414
50872 -0.518061969073891 -0.644489474982414 0.308232087399672 -0.395999222297924 0.0871532746123127 0.142517986574754 0.324197322744014 NA NA NA NA NA NA NA NA NA NA NA NA NA -2.13357925016078 -2.20197953715766 -2.15393079845926 -1.47195324551316 -1.49885733181208 0.287326927773537 0.120612630659608 1.24523097671639 1.32094416107815 -0.109458768190808 0.172647948476333 2.18757616333549 1.97585004615094 1.59718146518215 1.55942976550568 1.7423166781387 1.65846083203104 0.66647656371572 1.20962366994168 -0.286577800081019 0.327345296189767 2.08878892596779 1.4570522525651 -1.79334912641723 -1.64692460709924 -1.61065793609116 -1.16298740945354 -0.910499505096384 0.0238372070016299 -0.272134916824637 -0.439504317041127 -0.481970450295018
52223 0 -0.0248172488687657 0.246780867255764 0.269891060501407 0.146036753062894 0.294024095499491 0.144816764940934 NA NA NA NA NA NA NA NA NA NA NA NA NA -1.10444200468368 -1.05716797480373 -1.03575083680491 -1.22769061742318 -1.37498029057059 -0.440944245879407 -0.490909864768101 1.06605627144563 1.33394828954278 0.0605184498941164 0.103273626622213 3.00764793502877 2.84999531212773 2.91022372022471 2.63098785484671 1.88798607232148 1.72773529867204 0.523811080769927 0.593856027480922 -0.162107130347474 0.0628381348724115 2.01461653495112 1.94812580800191 -1.04429492157532 -1.06537946980363 -1.05055083063819 -1.75277969328807 -1.85409242524153 -0.537081856951902 -0.229491243523811 -0.154677254596339 -0.0673281782287153
54355 -0.174367652157162 -0.324279095191536 -0.226094446120695 0.284365416557914 0.325844631074823 0.938775221932319 -0.0393809850617854 NA NA NA NA NA NA NA NA NA NA NA NA NA -2.2496989172352 -2.15511961549085 -2.2518726306608 -1.27818935150603 -1.25623432512509 0 -0.0687587368816985 1.68053378681521 2.14217025433138 1.40578901124075 2.09422776207707 1.57866557509706 2.30368699787855 2.22764385251842 2.74003773584802 1.9007936847561 1.95077176945484 0.523061451349596 0.919341736335559 -0.300137007161031 0.0701554786062798 1.91921584621511 2.51691315642068 -1.13067496072818 -0.539549917590719 -0.693121589623625 -0.180937953782751 -0.621756652564115 -0.122960044237199 0.18847332044873 0.106640356984328 0.161247943407189
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7018 0.0572385210244056 0.126219672971819 -0.419989574209273 1.12585201030889 0.67381722006632 1.76899062206918 0.372278478874305 -1.61347582287018 -1.33629380581833 -1.7591992872778 -1.80747203710436 -0.84800122058103 -0.0389902497172641 0.180771952766866 -0.464345884426528 -1.6483357733896 -1.75055516802008 -2.00908520219782 0.0865137874173776 0.112026072101184 -1.68381199609456 -1.81651083645066 -1.60335735287412 -1.1896867666304 -1.07072680560412 0.700458293599043 0.249543767172267 0.751519412667005 1.7308519287604 1.22840435391718 1.38171123460865 1.25498300761176 1.55150831554371 1.81059920122396 1.6657908119043 1.49299944339569 1.77713476621777 1.03869639984828 1.36751412143728 -0.264922966382503 0.516494624880263 1.66760754300628 1.56562073383937 -1.7255593815624 -1.26089162762225 -1.03343316880078 -0.918396350944504 -0.907099589445936 -0.117965395401399 0.717593707672315 0.736870871484945 1.07310459563545
7359 0.0446590218116149 -0.187085995832022 0.611053884428012 NA 1.01991860720808 NA NA -0.71594401359619 -1.73290656669491 -1.7251158555571 -0.736968122386728 1.08415612577616 0.941318954708279 0.462471921697667 -1.27280891871736 -1.91490040499213 -2.1619850603984 -2.05357206394595 0.933860739107063 -1.60539385701919 -0.553705908015017 -0.865390017565873 -0.488806799406534 -0.875885648519647 -0.923883809860553 0.381680887539156 0.592296427839451 -0.161298424302754 -0.11902822562826 -0.168440410957418 -0.252664493105658 1.52592744741063 0.84780338907702 1.18570248754572 1.23745818268324 1.19583586065519 1.04670388897037 0.470146189148287 0.640417019340322 -0.0109070725999519 0.0408247687405167 0.81484700662448 0.259727716272219 -1.36887726775231 -0.793576417178313 -1.05265924519943 -1.0760207469973 -1.46101607843603 0.339141690829971 0.496226610294949 0.347194296851423 -0.334109000029868
[+] Show/hide bicluster #42 motif PSSM #1. bicluster 42 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 1 0 0
4 0.4 0 0.6 0
5 0 0 1 0
6 1 0 0 0
7 0 0 0 1
8 0.4 0 0 0.6
9 0 0 0.4 0.6
10 0 0.4 0 0.6
11 0.2 0.4 0 0.4
12 0 0 0.4 0.6
13 0.4 0.6 0 0
14 1 0 0 0
15 1 0 0 0
16 1 0 0 0
17 0 0 0 1
18 0.4 0.6 0 0
19 0 1 0 0
20 1 0 0 0
21 0.4 0.6 0 0
22 0 0.6 0.4 0
23 0 1 0 0
24 1 0 0 0 [+] Show/hide bicluster #42 motif PSSM #2. bicluster 42 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.166667 0 0.666667 0.166667
2 0 0 1 0
3 0 0 0 1
4 0 0 0 1
5 0 0.166667 0.833333 0
6 0.166667 0 0.5 0.333333
7 0.166667 0.666667 0 0.166667
8 0.166667 0.5 0.333333 0
9 0.333333 0 0.333333 0.333333
10 0 0 1 0
11 0 0.333333 0.333333 0.333333
12 0 0.166667 0.833333 0
13 0 0.833333 0 0.166667
14 0 0 0.666667 0.333333
15 0.166667 0 0.666667 0.166667
16 0.166667 0 0 0.833333
17 0.333333 0.666667 0 0
18 0 0.833333 0 0.166667
19 0 0.666667 0.333333 0
20 0 0 1 0
21 0 0.333333 0 0.666667
22 0 0 0 1
23 0 0.833333 0.166667 0
24 0 1 0 0 |