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[+] Show/hide bicluster #58 rows and columns.
bicluster 58
Phaeodactylum tricornutum
46x57
[+] Show/hide bicluster #58 rows (genes).
bicluster 58 genes
Phaeodactylum tricornutum
46
[+] Show/hide bicluster #58 rows (short gene names).
bicluster 58 short names
Phaeodactylum tricornutum
46
short_name
[+] Show/hide bicluster #58 rows (long gene names).
bicluster 58 long names
Phaeodactylum tricornutum
46
long_name
[+] Show/hide bicluster #58 rows (NCBI RefSeq gene IDs).
bicluster 58 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #58 gene upstream sequences.
bicluster 58 upstream sequences
Phaeodactylum tricornutum
46
upstream
[+] Show/hide bicluster #58 columns (arrays; conditions).
bicluster 58 arrays
Phaeodactylum tricornutum
57
[+] Show/hide bicluster #58 ratios.
bicluster 58 ratios
Phaeodactylum tricornutum
46x57
GENES GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_3 GSE34988_Copper_1 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_3 GSE34988_Oil_2 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3
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50462 0.155917040553464 -0.537405127635109 0.0713668039628805 0.0115321510918119 0.096506125150835 NA NA NA -0.298819015448237 0.130200559710221 NA -0.672087890233174 0.271823849808593 0.379182851510711 NA NA NA -0.0287375200468121 0.0692042817101532 -0.296400789550761 0.386828390488681 0.402229055720942 -0.507577218572398 -0.55425584586299 -0.594573808461379 -0.245985887816639 -0.389324971288726 -0.8800354397453 -0.504733867100983 0.785347494629865 0.499374485279721 -0.390050928547803 0.0105193001879823 0.0277245537110515 -0.067931147874589 -0.162679780962487 -0.80615542401732 -0.44398317418715 0.619956517380118 0.692904331400533 0.585052440514738 -0.0603451972953875 0.306387261143696 0.0572318814748268 0.680011121080377 0.476758344944827 0.0688784839611733 0.00316840036437945 0.420208020052451 -0.149084233999668 -0.0603451972953875 -0.0473326023794023 0.630206259099205 0.519155559079508 0.114219100384076 0.403477402093178 0.0154244314890496
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7195 0.213514569920464 -0.229152256731542 -0.368333683845048 -0.261660601813798 0.598995578803349 -0.51100351801641 -0.65096682947047 -0.370498902018889 -0.0098336992061966 0.982473760875431 -0.598135506028741 -0.727573451359962 0.81635942547731 0.731518960032294 -0.581950500179277 -0.256012991077029 -0.664553573511324 0.0714582142316907 -0.364427269389743 -0.240964724768832 -0.0585631371074813 NA -0.112249028256612 -0.926283983763395 -0.223243073806034 -0.162800322830831 0.0135601978645924 -1.46372065365192 -0.140635309167944 -0.0803105806267001 -0.159016658202498 -0.881581105868085 0.0507399891279218 0.153665367196009 0.336278579672973 1.10579432913344 1.05265891884268 0.891497580162165 2.18555954441824 2.46361509430873 2.5135073974739 1.10107194567631 0.0717205149390631 -0.231172604471939 1.14323877355968 0.0754313132888176 -0.198011333071107 -0.281720301481304 0.29233570041964 0.903731757943138 -0.294512094305821 -0.222842598638747 0.846457979159568 0.779421023004405 0.19501129589328 -0.0382603189886197 -0.641500387042477
[+] Show/hide bicluster #58 motif PSSM #1. bicluster 58 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0 0 1
2 0.44 0 0.44 0.12
3 1 0 0 0
4 0.16 0.84 0 0
5 0.24 0 0 0.76
6 0 0.08 0.92 0
7 0 0 0 1
8 0.48 0 0.48 0.04
9 1 0 0 0
10 0.68 0 0.2 0.12
11 0 0.04 0.12 0.84 [+] Show/hide bicluster #58 motif PSSM #2. bicluster 58 motif PSSM #2 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.450268 0.003578 0.357424 0.18873
2 0.338462 0.630769 0.030769 0
3 0.784615 0 0.215385 0
4 0.830769 0 0.169231 0
5 0.630769 0.2 0 0.169231
6 0.076923 0.138462 0.523077 0.261538
7 0 0.092308 0.907692 0
8 0.8 0.2 0 0
9 0.769231 0 0.230769 0
10 0.953846 0.015385 0.030769 0
11 0.676923 0.2 0.107692 0.015385 |