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[+] Show/hide bicluster #90 rows and columns.
bicluster 90
Phaeodactylum tricornutum
38x73
[+] Show/hide bicluster #90 rows (genes).
bicluster 90 genes
Phaeodactylum tricornutum
38
[+] Show/hide bicluster #90 rows (short gene names).
bicluster 90 short names
Phaeodactylum tricornutum
38
short_name
[+] Show/hide bicluster #90 rows (long gene names).
bicluster 90 long names
Phaeodactylum tricornutum
38
long_name
[+] Show/hide bicluster #90 rows (NCBI RefSeq gene IDs).
bicluster 90 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #90 gene upstream sequences.
bicluster 90 upstream sequences
Phaeodactylum tricornutum
38
upstream
[+] Show/hide bicluster #90 columns (arrays; conditions).
bicluster 90 arrays
Phaeodactylum tricornutum
73
[+] Show/hide bicluster #90 ratios.
bicluster 90 ratios
Phaeodactylum tricornutum
38x73
GENES GSE12015_Si_free_23v20_2 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_48hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_3 GSE34988_Control_2 GSE34988_Control_6 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_4 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_4 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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8230 0.186731614401264 0.929824992484331 -0.0469831482099063 -1.08158822737592 0.54495187321736 -1.00360503632381 -0.0949254980881871 0.487572375714746 0.279902947858254 0.479067015968012 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.8007864376405 -2.70240263096102 -2.6120081350978 -0.0183034205200345 0.110326104008786 -0.675677099258761 -0.782116730429698 -1.21261439806955 -1.30828579549417 0.343591552488741 0.270593847115475 0.292521408204403 -0.867212880956787 -2.59652011127921 -2.66535554241836 -0.382366845850251 -0.0429499529513198 -1.15915563515599 -1.78588865314572 -1.61354879401513 0.907215308962427 -0.838968581640706 -0.342285589260777 0.282887554322668 -0.837351743033433 0.059348286816086 -0.561850967112265 -0.33240372486976 0.00681999812244991 -0.445030949194582 0.382387422992941
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[+] Show/hide bicluster #90 motif PSSM #1. bicluster 90 motif PSSM #1 Phaeodactylum tricornutum 10x4
POSITION A C G T
1 0 0.448276 0.137931 0.413793
2 0 0 0 1
3 0.241379 0 0.724138 0.034483
4 0.965517 0 0 0.034483
5 0 0.965517 0 0.034483
6 0.37931 0 0 0.62069
7 0 0 1 0
8 0 0 0 1
9 0.310345 0 0.655172 0.034483
10 1 0 0 0 [+] Show/hide bicluster #90 motif PSSM #2. bicluster 90 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 0.153846 0.538462 0.307692
2 0.076923 0 0 0.923077
3 0 0 0 1
4 0 0 0.307692 0.692308
5 0 0.846154 0 0.153846
6 0 0.846154 0 0.153846
7 0 0 0.923077 0.076923
8 0.230769 0.076923 0.230769 0.461538
9 0 0.846154 0 0.153846
10 0 0 1 0
11 0.230769 0 0 0.769231
12 0.153846 0.461538 0.076923 0.307692
13 0.384615 0.076923 0.461538 0.076923
14 0 1 0 0
15 0 0 0.615385 0.384615 |