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[+] Show/hide bicluster #100 rows and columns.
bicluster 100
Phaeodactylum tricornutum
48x67
[+] Show/hide bicluster #100 rows (genes).
bicluster 100 genes
Phaeodactylum tricornutum
48
[+] Show/hide bicluster #100 rows (short gene names).
bicluster 100 short names
Phaeodactylum tricornutum
48
short_name
[+] Show/hide bicluster #100 rows (long gene names).
bicluster 100 long names
Phaeodactylum tricornutum
48
long_name
[+] Show/hide bicluster #100 rows (NCBI RefSeq gene IDs).
bicluster 100 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #100 gene upstream sequences.
bicluster 100 upstream sequences
Phaeodactylum tricornutum
46
upstream
[+] Show/hide bicluster #100 columns (arrays; conditions).
bicluster 100 arrays
Phaeodactylum tricornutum
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[+] Show/hide bicluster #100 ratios.
bicluster 100 ratios
Phaeodactylum tricornutum
48x67
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_24hr_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE34988_Ammonia_1 GSE34988_Cadmium_2 GSE34988_Cadmium_4 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Copper_1 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_4 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep3
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54974 1.19313356299594 -0.634557855550579 -0.600764356019825 -0.806051969991699 -0.517632347174168 -0.538435878146979 0.532489596795591 0.857011415233315 0.121099534937923 -1.21188979145917 -0.00225621316228443 0.176839859537763 -0.951500598455413 -0.871477433653037 -1.00672059791061 -0.035734865711383 -0.111654299527752 -0.240290660922158 -0.595544035171472 -0.650004833656135 2.1868372742377 -0.10655809767632 0.893675482000191 -1.29766709017717 -1.39864591986566 -0.985404953297713 -0.382315106723419 -0.533758116670999 -0.330023171880368 -0.79880624996119 -0.607198923627626 -0.949957072468668 -0.758799799750351 1.7468208448215 1.46959184723803 1.65724040163765 0.103348068041815 0.27609867603745 -0.834385126225496 -0.0137468788080378 0.538590995270042 1.09624623632672 1.27958010759431 0.0499750443753219 1.11914556921533 -0.0918698467182313 0.0930525140701112 0.0580934291981606 -0.269043869689054 0.97776171707645 1.30133805116459 1.34440761234435 1.23890746675524 1.23454616435406 -0.0523180562368779 0.208919366320072 1.2881006320325 1.04184798108014 1.14463121891319 0 -0.398947063560561 -0.0796948745805886 -0.188712702945774 0.660005075085539 0.669024325566838 -0.696283292237015 -0.516213279859468
55096 0.969156495988749 -0.422982504558827 -0.414364874279692 -0.438389782936675 -1.49228679502819 -0.174786918310387 0.402677875291351 0.752856587385569 -0.921836230193047 -0.802048557909952 0.160718319681267 -0.0777367329486349 -0.651518774068188 -0.737920806544792 -0.755367747439555 0.0255148614171633 0 -0.91293035811271 -0.422411458245895 -0.996676489165346 0.709313890289096 0.516243770322477 0.273727756045448 -1.13220434149538 -1.40819549358645 -1.05236727199348 -0.690217083708448 -1.08753806696931 -0.811582806002646 -0.976207945954407 -0.741501040215305 -0.797868489818568 -1.02534415919223 1.33652589668464 1.44260895979294 1.68312504707429 -0.214320390491961 -0.561452395545887 0.136290022509217 -0.177071337284759 1.01931986719518 1.1465217515895 0.322830636184886 1.49300780569718 1.9393725543464 -0.312513415398245 0.170601031800699 0.195064123100444 -0.21695365425468 1.09680585720688 2.15661383386918 1.09439745349284 1.38254007790221 1.25400391651563 0.117557243997993 -0.221447085500604 0.924162888634646 0.422555368685816 0.215730024174382 -0.265889216458148 0.118301127186827 -0.38533978314933 -0.0705490336845035 1.32187440030036 1.70559955026706 -0.154918223539614 -0.343002170186252
58067 -0.35294205702688 -0.657993890678431 -0.379658380037764 0.0434310261891484 -1.23979768564309 -1.17707747424009 0.380474442267915 0.477785005700104 -1.5719738734206 -0.953811591594765 -0.0838941117674512 -0.703897391124404 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.36607873516151 1.06644731453784 1.23097161655723 -1.30852811361346 -1.62985450657449 0.972973880317418 1.37819623481044 1.82905260776333 1.46088925625092 0.318088559562863 1.83676492764024 1.55205746519647 0.264026351112873 0.383944327555859 0.161973859751207 -0.786847619569894 2.02907013211606 2.58816907880463 0.171913600391589 0.370022189855492 -0.00660707976833655 -0.841826751192285 -1.25816645401283 1.96082656498699 1.84359976920921 1.16172241147574 -0.751677040884201 -0.0449339774320641 -0.658351851633244 1.08019455153182 1.24541531696343 1.42272606049443 -0.169665724242136 -0.534965888093333
9171 -0.699382645667374 -1.12524246734795 -0.61837670132596 -0.435534712669625 -0.296496109802021 -0.663351201624313 -0.25248905192466 0.906900425867398 0.998150150484672 -0.76075274910043 -1.163032897611 0.0698359150653803 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.49422125869823 1.52465575369303 0.781371615321228 0.271622766118907 -0.5953899552675 -0.183129977512966 0.0414294112114634 0.262055701709402 0.741879852509945 0.226517578806478 2.27840747286307 1.44985246449743 0.674389903888682 1.18113735441066 0.272495354815321 -1.14709140205102 2.43622564615911 0.890098950899408 0.894127004292773 0.681990748339785 0.0980219090809742 -0.435783183898901 -0.576176363545251 1.50664325901891 1.19826997106496 0.179875779766986 -0.666657975847131 -0.422991892872105 -0.887567715114986 0.353970408010767 1.5081919552678 0.815700772373064 -0.670155130400949 -1.27498871340723
9912 -0.234970028899267 -0.680349620684236 -0.468611781966792 -0.676698968292556 -0.670335600354443 -0.172743254786006 0.221535628097884 -0.186593268321211 -0.254882933598808 -0.630571571226605 -0.668552397070815 -0.0958212006991596 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.50457139099274 1.5582809730302 1.28904553114646 -0.921483692886452 -0.860541493242734 0.575577807310007 0.650733016161903 1.71850702779237 1.89314103640996 1.61353098089307 2.22474239203973 1.17966498771024 -0.0454351374145839 0.836006919501342 1.24869374123319 -0.913941421324722 3.15455264206967 2.33008403221811 1.32557325070662 0.665678278620709 1.21927757709627 -0.601539850570372 -0.307539111919754 1.36855443982144 1.03596618571969 1.29773898839835 -0.146116089144645 -0.314429199804657 -0.30852197651215 -0.267646833612038 0.268077229882962 0.626402959038771 -0.232782145645644 -0.270056927751409
[+] Show/hide bicluster #100 motif PSSM #1. bicluster 100 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.08 0.6 0.2 0.12
2 0 0 0 1
3 0.2 0 0.8 0
4 1 0 0 0
5 0.04 0.92 0.04 0
6 0.52 0 0 0.48
7 0 0 1 0
8 0.12 0 0 0.88
9 0.28 0.04 0.68 0
10 0.96 0.04 0 0
11 0.6 0.04 0.36 0 [+] Show/hide bicluster #100 motif PSSM #2. bicluster 100 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 0 1 0
2 0 0.8 0 0.2
3 0 0 0.8 0.2
4 0 0.4 0.2 0.4
5 0.2 0.6 0.2 0
6 0 1 0 0
7 1 0 0 0
8 1 0 0 0
9 1 0 0 0
10 1 0 0 0
11 0.2 0.2 0.4 0.2
12 0.2 0.4 0.2 0.2
13 0.2 0 0.4 0.4
14 0 0.2 0.4 0.4
15 0.2 0 0 0.8
16 0 0 1 0
17 0 1 0 0
18 0 1 0 0
19 0 0.2 0.4 0.4
20 0.8 0 0.2 0
21 0 0 0.6 0.4
22 0 0 0 1
23 0 0.8 0.2 0
24 0 0 0.8 0.2 |