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[+] Show/hide bicluster #102 rows and columns.
bicluster 102
Phaeodactylum tricornutum
20x66
[+] Show/hide bicluster #102 rows (genes).
bicluster 102 genes
Phaeodactylum tricornutum
20
[+] Show/hide bicluster #102 rows (short gene names).
bicluster 102 short names
Phaeodactylum tricornutum
20
short_name
[+] Show/hide bicluster #102 rows (long gene names).
bicluster 102 long names
Phaeodactylum tricornutum
20
long_name
[+] Show/hide bicluster #102 rows (NCBI RefSeq gene IDs).
bicluster 102 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #102 gene upstream sequences.
bicluster 102 upstream sequences
Phaeodactylum tricornutum
18
upstream
[+] Show/hide bicluster #102 columns (arrays; conditions).
bicluster 102 arrays
Phaeodactylum tricornutum
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[+] Show/hide bicluster #102 ratios.
bicluster 102 ratios
Phaeodactylum tricornutum
20x66
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_5 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_5 GSE34988_Control_4 GSE34988_Dispersant_1 GSE34988_Mixture_1 GSE34988_Mixture_3 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Salinity_15ppt_2 GSE34988_Silver_4 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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2182 0.18860798950789 -0.0101139748075938 -0.161558987115488 -0.286837029717689 0 0.0361045379759453 2.13393578421839 0.995644376974761 0.646769872248307 0.472621338584529 0.366081198378769 0.419445351968231 0.458160706696835 1.1052187096228 -0.418077613282042 -0.268869435867641 -0.351905169037986 -0.36648458132749 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.97925845986463 -3.00560641994844 -3.03004018921788 0.334847581981316 0.129005757150636 -1.18524495390064 -1.28936182254802 -1.07929474567285 -1.2407439810872 -0.654721713960667 0.329766021055176 1.24697850644751 -2.10912213275522 -1.50458616465449 -0.309161267256515 -2.01991205424123 -0.67340485751894 0.040495994267304 0.0975772899154883 -1.55238093465347 -0.900027030393256 -1.04133849063031 0.175201842716604 -0.970169687613898 -0.877188590548484 -1.17420422164353 -0.0186053469182399 -0.0924310318596563 -0.180307570387775 -0.934606549427069 -0.714896574153345 -0.866049591764832
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46516 0 -0.256385510558367 -0.298978320004715 -0.408692093753673 0.198545469714883 0.0266826549449884 2.37717388779968 1.3058735782972 1.03705535924607 1.04651527194333 0.772636877972272 0.968260514105291 0.397018432215241 1.09399506764863 -0.166188607324683 -0.0180708694941874 -0.573780663052285 -0.483117642010944 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.67034171150268 -2.75860010939441 -2.67297592816238 0.0297592335833165 0.337909275980543 -1.0169874557759 -1.01325324744023 -0.993891703138407 -0.741996053249031 -0.307195715129543 0.745455055391496 1.55176350707199 -2.30014282211845 -1.35296750860345 -0.177257061442637 -1.76280233320663 -0.546234257458152 0.20253307615675 0.341374993381304 -1.42802661184439 -1.11601947334432 -1.03874450839345 0.0585568205293345 -0.981867946747613 -0.914378321577866 -1.15636730441425 -0.14162735433557 -0.118681698305671 -0.00153555598274549 -1.20660238908333 -1.23530399302028 -1.39407270428178
47181 0.122123324331913 0.165758228597347 -0.122493296088777 -0.108347317149858 -0.0473019772672926 0.061948506230204 1.89196592286019 1.80170913646876 0.862816574943739 0.094263362887825 0.459880334543122 1.11802744543745 0.857299643157561 1.26168856677998 -0.0448819267165114 -0.00360504832497217 -0.209901299952356 -0.182316641021465 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.84831003507182 -2.96465900138135 -2.98960798637482 0.293371916842132 0.296405595938204 -1.17134730013041 -0.893042855388437 -0.942149656862257 -0.600253205675462 -0.103443355585597 1.45756882937264 1.54493542598312 -2.04057488453095 -1.37005998021509 -0.0747559594932718 -1.57733395521874 0.269413287624677 0.258178631352947 0.247324463162902 -0.762157044407538 -0.477322540638555 -0.634086622255365 0.189625395646749 -0.924415079793872 -0.617157722847395 -0.856154753007178 0.180362197400647 0.123083968491386 0.136830948709847 -0.72049939946309 -0.604522930677859 -0.657535661086541
48920 0.180714395607046 0.104432983363954 -0.274131901035599 -0.293733120455666 0.0645771705431516 0.16415136519709 1.70511821762912 0.901597589454565 0.798278255143433 0.199633492591295 0.57505564814383 0.786450879345365 0.513528727132203 0.855295588940484 -0.190518325981441 -0.0145921546944975 -0.402177520271165 -0.198378414968887 2.77128377888514 2.53147337860172 -1.28996317579878 -0.728532439051402 -1.39960697423059 0.070010353604844 0.111585828448295 2.67186972619387 2.43233158684819 0.0948398141213128 0.192030030064505 0.693587411204271 0.232295214352895 0.0124452585041071 -0.962695662682509 -1.29394810370688 -3.241367723255 -3.27031062794663 -3.27683577792499 0.0340629818571025 0.111016753336245 -0.569687793959746 -0.602856602328725 -0.431342251260838 -0.748872704696374 -0.303833002744804 0.29125276851979 0.632137289918271 -1.94116733761791 -1.32245134633487 -0.0706359897731651 -1.61600603264718 -0.676193569145007 -0.0621195862947255 -0.0671762763099272 -0.78173693837789 -0.289636306476977 -0.546657545284219 -0.200517130425613 -0.643770096248577 -0.621179732389316 -0.710308994062346 -0.222993738205964 -0.262351420418173 -0.18063149706509 -0.641992097444602 -0.570443983127682 -0.674023960789217
54710 0.0752673398789897 0.0876023243437442 -0.126445935485819 -0.20783264670915 -0.0963340616453889 -0.0538872033402043 1.40791850314362 0.91250924767301 0.707405060892596 0.483099414962048 0.560016508285209 0.667881110180678 0.470076331854113 0.861331155266303 -0.14673698493034 0.103156497891359 0.0715281465490857 -0.00600690530951567 3.19587603643085 2.82995146641069 -0.184616308031757 -0.169343601899256 -0.128880142583833 0.0210634333563754 0.0702916664425989 2.96832096861238 2.68617905961661 1.30315544773453 0.302992079540588 0.416689170002117 0.344958012522551 0.020759571897896 -0.419004292121988 -0.463121772908899 -2.67006870694243 -2.69533190651833 -2.74640996955578 -0.0761596294682134 0.17013232506384 -0.788968361619113 -0.844728473601848 -0.738136636877892 -0.648245290634196 -0.435876522574691 0.705588994314703 0.929166476516352 -1.37312885970134 -0.947006917524058 -0.103909067549476 -1.47992973836658 -0.517766430437409 0.060859448510447 0.0874047925933561 -0.937938434945181 -0.935955605646478 -0.84373797235013 -0.26388259617987 -0.909512638975501 -0.863056131002863 -0.91154318847606 -0.349140865977341 -0.340535909498453 -0.102760300774103 -0.826680885658287 -0.631830966438514 -0.750680800268153
60871 0.166102937115523 0.198672140471508 -0.302032566294353 -0.277324894782916 0.117436311411178 0.422912977370761 2.12383213546389 1.29621685770227 0.503418807045526 0.266796057491111 0.0907857184581598 0.747966729416567 0.308845893892961 1.28466227768409 -0.30608874236748 -0.0454976796536738 -0.686828344978834 -0.559432221437932 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.68703738810455 -3.62251055273197 -3.71009562972275 0.223497678169542 -0.0410299159421088 -0.772951939057648 -0.814641712793922 -0.723839896800803 -0.841332941630734 -0.0650882826202676 0.623935155109004 1.50492722792999 -1.81182230634262 -0.809353029478931 -0.143365826128624 -1.95622620236276 -0.275463445984656 -0.0705777808565522 -0.0883951451316806 -0.931321972621451 -0.723014118834448 -0.790991161980446 0.118790229125787 -0.673668654877122 -0.590078664525994 -0.844366997579642 0.0183503405232699 0.0340310347846587 -0.186046596029255 -0.536804849269757 -0.457365265176494 -0.569663467878372
9372 0.0278864432036436 0.197930491708372 -0.0144322114016054 0.124449918711985 0.0494304855481341 0.0373119617293582 1.6599726831874 1.47989526639081 1.08462749092653 1.30452483813145 0.818620122378769 1.06652472463153 0.738341634592611 1.4711102984098 -0.147055027784037 -0.220541371506052 -0.498159440017323 -0.196729433989762 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.36739484625805 -2.36945916532112 -2.31676044411432 0.684604798881214 0.409214954773014 -0.976668501245321 -1.00522654994409 -1.31157216902696 -1.13460704601585 -0.14543670415851 0.668497574693078 1.59780204380753 -1.87393544426204 -0.983493954071572 -0.201986191642866 -2.32624046420322 -0.271530758187577 -0.0714137063626212 -0.0297240320687642 -0.993170718163575 -0.944734608071128 -0.802343297480785 0.119248366258184 -1.36295120090926 -0.827498958172046 -1.20553346219036 -0.401830535073807 -0.257504979869584 -0.743084997669972 -0.932457353955878 -0.950914213046066 -1.1907310366852
9983 0.202913730956079 -0.0301786984121125 -0.415242360956507 -0.324269236544822 0.152815627881441 -0.039401780149703 2.03222395509962 1.45123897874446 0.934949728468621 0.684153174474137 1.09450275406411 0.83456906068459 0.842362564752858 1.37991311458879 -0.0923653270278151 -0.19092862847855 -0.173081965316313 -0.026332254096549 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.67074208970278 -3.59642411549309 -3.3851890171795 -0.0354897014567359 0.245047721868893 -1.01038318088791 -0.909351467301354 -1.02503866087299 -0.418941226557582 0.237962595444547 1.04937412756306 1.47198130477604 -1.64479816282143 -0.827015781769924 0.111292061336055 -0.738487619324963 0 0.205858026220539 0.223473779467308 -0.917117717616599 -0.941915904527718 -0.88575859220852 -0.131262659724251 -0.80237756724507 -0.765942500376381 -1.18630356714407 -0.237681542744024 -0.256826493745454 0.0408917844390503 -0.639524235095429 -0.752980734286701 -0.928534100445179
[+] Show/hide bicluster #102 motif PSSM #1. bicluster 102 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.266667 0 0 0.733333
2 0.2 0.066667 0.733333 0
3 0 0 0.133333 0.866667
4 0 0.866667 0.066667 0.066667
5 0 0.266667 0.6 0.133333
6 0 0 0 1
7 0 0.8 0.133333 0.066667
8 0.066667 0 0.933333 0
9 0 0 0 1
10 0.066667 0.733333 0.066667 0.133333
11 0 0.133333 0.866667 0 [+] Show/hide bicluster #102 motif PSSM #2. bicluster 102 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 0 0.714286 0.285714
2 0.571429 0.285714 0 0.142857
3 0 0.285714 0.714286 0
4 0.857143 0 0 0.142857
5 0.142857 0 0.857143 0
6 0.142857 0.285714 0.571429 0
7 0.714286 0.142857 0.142857 0
8 0.285714 0 0.142857 0.571429
9 0 0.285714 0.428571 0.285714
10 0 0 1 0
11 0.428571 0.142857 0.428571 0
12 0 0.857143 0.142857 0
13 0.142857 0 0.857143 0
14 0 0.285714 0 0.714286
15 0 0.142857 0.857143 0
16 0.142857 0.714286 0.142857 0
17 0.142857 0.428571 0.142857 0.285714
18 0 0 1 0
19 0 0.142857 0.857143 0
20 0.571429 0 0.142857 0.285714
21 0.142857 0.571429 0 0.285714
22 0 0.142857 0.571429 0.285714
23 0 1 0 0
24 0.142857 0 0.714286 0.142857 |