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[+] Show/hide bicluster #125 rows and columns.
bicluster 125
Phaeodactylum tricornutum
35x75
[+] Show/hide bicluster #125 rows (genes).
bicluster 125 genes
Phaeodactylum tricornutum
35
[+] Show/hide bicluster #125 rows (short gene names).
bicluster 125 short names
Phaeodactylum tricornutum
35
short_name
[+] Show/hide bicluster #125 rows (long gene names).
bicluster 125 long names
Phaeodactylum tricornutum
35
long_name
[+] Show/hide bicluster #125 rows (NCBI RefSeq gene IDs).
bicluster 125 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #125 gene upstream sequences.
bicluster 125 upstream sequences
Phaeodactylum tricornutum
35
upstream
[+] Show/hide bicluster #125 columns (arrays; conditions).
bicluster 125 arrays
Phaeodactylum tricornutum
75
[+] Show/hide bicluster #125 ratios.
bicluster 125 ratios
Phaeodactylum tricornutum
35x75
GENES GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_2 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Cadmium_5 GSE34988_Control_1 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Dispersant_2 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_5 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_4 GSE34988_Salinity_15ppt_5 GSE34988_Silver_2 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_1 GSE42039_light_6h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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13622 -0.325146730168774 -0.202129873171604 0.178445698679114 1.26994345396488 0.933801771296343 1.30419024456151 1.30835177204567 1.01958535921337 1.37260365183574 -0.39255044715034 0.777673085743682 1.01478494581202 1.08626751092375 1.26115188265729 0.886048180779722 1.16172119046198 1.12195492662778 1.41748601387744 0.404468503572917 0.380463931131168 0.65420525045202 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.8278990884187 -2.86856804867893 -2.93134066775875 0 -0.428181485274497 0.331166640300673 0.81384302938848 0.576461507639384 0.736584632767169 0.936469485168111 1.03302767615189 0.863823368481978 0.991698204553212 1.30423621532262 1.21622239983037 0.706841993038158 0.295102968351961 0.703394689630544 0.934343007182002 0.0672431654785212 -0.662678770121654 -0.87435425836428 -0.686835925760841 -0.576871816357244 -0.870822640645763 -0.747437011080666 -1.07409110689271 -0.397816657985219 -0.586894754116679 -0.049531678613298 -0.848920309958908 -0.656016198614243 -0.926194158430958
19004 -0.425236547658512 -0.467895652867911 -0.186096454221879 1.84271454107775 0.957899309165511 1.64330346394526 1.42230750233747 1.16214612282284 1.56769720601902 -0.402536921601832 1.17499990284505 0.643682304363636 1.06405197746432 1.80844402195843 1.0508930447187 1.3845868891618 1.33937446524644 1.54413194264496 0.207715590533475 0.0962601152148445 0.0424971874378016 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.18318782244441 -3.35692037082745 -3.11772938081829 -0.00516074070757437 -0.103101283369069 1.06041999243726 1.03930662013772 0.947212756137548 1.12865564122947 1.02476782067027 1.09362317443633 1.01538624449963 1.17503938192789 0.997128738773857 1.05687868644746 0.551570773021311 0.293910064546973 0.991699859991964 1.13093823418324 -0.061603644361622 -0.506419151073822 -1.17769500499723 -0.610620219122262 -0.402379653632876 -0.760165230362128 -0.832013624810942 -0.946394680743727 -0.399695474063898 -0.397243237218484 -0.276840074952356 -0.600223090518084 -0.793208592827798 -0.743747809350366
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[+] Show/hide bicluster #125 motif PSSM #1. bicluster 125 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 0.454545 0.454545 0.090909
2 1 0 0 0
3 0.181818 0.090909 0 0.727273
4 0.090909 0.181818 0.545455 0.181818
5 0 0.636364 0 0.363636
6 0 0.181818 0.818182 0
7 0 0.090909 0.909091 0
8 0.272727 0.090909 0.636364 0
9 0.636364 0.090909 0 0.272727
10 0.090909 0.727273 0.181818 0
11 0 0.090909 0.909091 0
12 0.818182 0 0.090909 0.090909
13 0.545455 0.090909 0 0.363636
14 0 0.272727 0.636364 0.090909
15 0 0.545455 0.363636 0.090909
16 0.090909 0.636364 0.272727 0
17 0.181818 0.181818 0.454545 0.181818
18 0.363636 0 0.454545 0.181818
19 0.181818 0.454545 0.181818 0.181818
20 0 0.636364 0.363636 0
21 0 0 1 0
22 1 0 0 0
23 0.727273 0.181818 0.090909 0
24 0.272727 0 0.727273 0 [+] Show/hide bicluster #125 motif PSSM #2. bicluster 125 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 1 0 0 0
2 0.222222 0 0.777778 0
3 0.888889 0 0.111111 0
4 0 0.333333 0.555556 0.111111
5 0.111111 0.888889 0 0
6 0.222222 0 0.777778 0
7 1 0 0 0
8 0 0 1 0
9 0.222222 0.111111 0.333333 0.333333
10 0.222222 0.777778 0 0
11 0.777778 0 0.222222 0
12 1 0 0 0
13 0.555556 0 0.333333 0.111111
14 0 0.111111 0 0.888889
15 0.111111 0.888889 0 0 |