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[+] Show/hide bicluster #131 rows and columns.
bicluster 131
Phaeodactylum tricornutum
23x74
[+] Show/hide bicluster #131 rows (genes).
bicluster 131 genes
Phaeodactylum tricornutum
23
[+] Show/hide bicluster #131 rows (short gene names).
bicluster 131 short names
Phaeodactylum tricornutum
23
short_name
[+] Show/hide bicluster #131 rows (long gene names).
bicluster 131 long names
Phaeodactylum tricornutum
23
long_name
[+] Show/hide bicluster #131 rows (NCBI RefSeq gene IDs).
bicluster 131 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #131 gene upstream sequences.
bicluster 131 upstream sequences
Phaeodactylum tricornutum
23
upstream
[+] Show/hide bicluster #131 columns (arrays; conditions).
bicluster 131 arrays
Phaeodactylum tricornutum
74
[+] Show/hide bicluster #131 ratios.
bicluster 131 ratios
Phaeodactylum tricornutum
23x74
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE34988_Ammonia_1 GSE34988_Ammonia_5 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Cadmium_5 GSE34988_Control_2 GSE34988_Control_6 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_2 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_5 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Salinity_15ppt_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep2 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3
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41092 -0.256245363633009 -0.187759370084348 -0.102226644517025 0.0269696402559943 0.86108418185758 1.03950664365291 0.509054212398503 0.744876310620885 1.0089331802447 0.743183600037979 0.852369413944881 -0.314605000231636 0.779448279416628 1.17879638817382 1.00709392757953 0.510489726673759 0.559183567152331 0.441594013425703 -0.28098106898851 0.733807897427715 0.123691152869777 -1.28879115814496 -0.654643456021034 1.81862263087652 0.305598662515392 0.0809250193696455 -0.00722361694558338 -0.195830962804213 0.227440858639994 0.362411166127226 0.880917939919528 1.49760252116533 0.914999142272418 -0.400482124614407 -1.5540901962151 -1.01413122120554 -1.42687252861813 -1.48829758632538 0.269202735262819 -0.445667269138779 1.36719699505469 -0.314480255038002 -0.154471045131733 -0.0709726974981004 -1.09244390809927 -4.82733862789169 -4.99250747678424 -4.72454060267794 0.304029245060332 0.394315866956006 -0.0903689342148587 0.602231433754222 1.1634335699953 1.68083601308782 -0.119430053907446 -0.626111140783076 0.18211256522083 -0.065137655257842 0.335372379030091 0.0281050938865619 0.7635161885012 -0.0944372834689488 -0.282016392760389 -0.232931858562572 -0.313867800117917 -0.110546490955963 -0.355098195411533 -0.0961147186735992 -0.377104734946097 0.177309787572294 -0.0412029312063725 -0.663456396709945 -0.573670387302951 -0.925751242503285
42750 -0.906311827542652 -0.676317602014086 -0.512482803285056 -0.356346556038154 1.46945394244994 1.51013597543831 0.748802161397321 0.412033838406321 0.840734895080617 0.538458488526887 0.638306295452745 0.164929582208727 0.938982846776595 0.587625768726963 0.398563779109936 -0.11650540200448 0.482244627923326 0.446364566421934 0.163125234205104 0.581570376826802 -0.350755483024259 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -4.05737839466113 -4.05379837081375 -4.03866512741352 0.363634463675334 0.345304420596721 -0.042367751211429 0.337088828428178 0.881213150311745 1.67193737775344 0.017859911342879 0.173359250495098 0.92347598817951 0.401209697400882 0.925893599817866 0.268004538976896 0.867565454930164 0.13312377649944 -0.13696995197027 -0.17988741185966 -0.388371439254404 -0.294576479415966 -0.372972220587563 -0.00988646008397822 -0.38113940463719 0.331142909540425 -1.78564226759998 -0.475088211319544 -0.435295209087134 -0.731590125780515
42872 -0.330561235847293 -0.437422904661157 0.0231706771245246 0.332871624705444 2.03454722822632 1.11757516381373 0.474463335883814 0.739166121025081 0.544880723062616 0.875103068895384 1.19439930382188 0.722217909824197 1.01616789267891 1.0489932247428 0.508745647645187 0.519924070825045 0.498029796966908 1.07910001574126 -0.663989431744476 1.12792986162981 -0.00317616626752317 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.96878139349637 -3.9721152326282 -4.07868057945602 -0.2860759376007 -0.452315078601344 0.102316911893675 0.68374616587486 1.62637367470448 1.73684415502627 -0.113775814671463 -0.0306092423290684 0.389399394258981 0.290273070440338 0.339739425194321 0.230344397257406 0.623067145194105 -0.575688529671613 -0.259935038743659 -0.252940278288392 -0.703657730748822 -0.57813193058053 -0.327769968507535 -0.550366555194246 -0.28219743281168 -0.462089178322272 -0.0788154035526502 -0.787043344007729 -0.683178142883522 -0.367722990162064
44554 -0.883958036090992 -0.736169557942011 -0.680353420170149 -0.831757518579655 1.30835523077736 0.935164466061889 0.630439990504797 1.17557835599754 0.729770118112085 1.02028294628265 0.408418308881902 0.138410567113845 0.576998863291567 0.74599295426853 0.654992311836429 0.267598938785084 1.08703859510526 0.454653052963372 0.120553922552174 1.04015981866489 -0.293095632878574 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -4.27472788899819 -4.31324668740774 -4.09165849427254 0.597563888279383 0.569408226733262 0.146398656674017 0.0846953061759905 0.670694202882755 0.76598643810294 0.88836845229088 1.60904620042335 1.45488529920126 1.21392087945055 1.43078446501417 0.654993445462782 0.792774738303762 0.00527332571966537 -0.299286990176256 -0.329613430080163 -0.311679645062985 -0.100941396004603 -0.307089851193446 0.135840629722236 -0.283055921953191 0.0281861874106972 -0.514030410617328 -0.143370014335302 -0.063445823185186 -0.40979675324271
46906 -0.508426985987045 -0.162959172426505 -0.440062642934168 -0.830195160622588 1.48865954901083 0.294124825225032 0.49413154726053 0.244811345769557 0.381011347622369 0.379379718634841 0.868148310479952 1.46817759183219 0.0157269898222352 0.719451306717074 0.624187873484324 0.424709835701768 0.162017568709652 0.945746397467838 -0.99180846759959 0.799856889392998 -0.0590544862318722 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -4.5141750755435 -4.45269167431439 -4.63013160494951 0.553634491493889 0.429537103101599 -0.0570067914161689 -0.176513123139109 0.757153381328831 0.852667032794905 -0.0556937869366964 0.609899462055134 0.76967105908844 0.74311669978175 0.563988050175721 -0.102868608905147 0.115196651981492 0 -0.583522444218978 -0.537741425863309 -0.0217924618448691 -0.159449058229801 -0.684149502944882 -0.234579744780582 -0.696119114993922 0.100484659991727 -0.457096064812443 -0.137356716052908 0.0111563431974385 -0.642679705100393
47818 -0.527366435023973 -0.660091440733552 -0.470292767345106 -0.517598793911146 1.11286374123549 0.790665650174562 0.126379869433738 0.550031192853225 0.268274966446888 0.522406005517655 0.501769469637125 0.0081626836123265 0.37828350328603 0.304043685157308 0.445854512325564 0.17845097268384 0.373330734674703 0.321183022474697 -0.261839814654909 0.508062894871781 -0.0984482462985501 -1.27775550850301 -1.50385380062471 0.713019669493891 0.296377710674274 0.512410697608299 -0.00640558488696762 -0.12662404928942 0.264439535220267 0.490952923360911 0.395952051079708 0.346737982855108 0.280223315473571 -0.184442824233565 -2.44813715356563 -1.68833466375554 -1.9802273076073 -0.371267219301964 0.196617823392171 0.0597903413823736 0.267095375991082 0.150745380105694 -0.542544491612269 -0.298480276501615 -0.695954153199038 -4.24963515214306 -4.24343061221717 -4.19776403411693 0.579271002992431 0.459038270923406 0.160191595367663 0.289260125618735 0.800348701761322 0.866334203036605 0.24303618489354 0.470971569364292 0.649165971095193 0.415827176617118 0.481998714892335 0.183744890633392 0.593740088507187 -0.0015514358330562 -0.494873776099466 -0.408219396661344 -0.0160381342926929 0.0228407938936379 -0.412145056970702 0.0905376145611518 -0.323534320065544 0.138472435467517 -2.29331308599094 -0.0563916086305391 0.223372597922927 -0.256004905528582
49325 -0.632923330420068 -0.620833772795614 -0.63256775519582 -0.885737314860876 2.51872478121254 2.26787001625734 0.552461350409978 1.63061165511111 1.49794653894393 1.52451156394755 1.64181938617943 0.774134056711087 0.72580782798345 0.918945622538602 1.02742806770463 0.70407507027737 1.10871611972012 1.17239253087858 -0.406617478947 1.39100729025115 -0.205091664851821 -1.44228878627203 -1.10007412328688 0.393197991935093 0.416588821802109 0.130726225272715 -0.0742899898944849 -0.1021175665141 0.64833690497965 0.651836501226972 0.719441990167354 0.510373540183553 0.53768745638997 -0.310494895601786 -2.12600671289116 -2.15941922777574 -1.74005789741194 0.121973261101281 -0.0625106289841601 0.0567555213062426 0.168730759498826 -0.00904096623564153 -0.115273248889172 0.0729777221062089 -0.512037073268785 -4.30992501743308 -4.40672161679531 -4.55153775951362 0.898219048515749 0.778977262557833 0.214113939311305 1.00527610780734 1.12225919921857 1.65632498792332 0.255712851989629 0.377177358603038 0.671383054653361 0.440262503317118 0.562828686614824 0.110808756059856 0.737394589446356 0.24400055963801 -0.189363677571848 -0.124719758321431 -0.0462156004512405 -0.169380354163677 -0.153761259243076 0.54598408176367 -0.0858415689532666 -0.0879359238014569 -1.10926198629406 -0.372812857102919 0.156682521127733 -0.502820398798172
50120 -0.483778359985949 -0.254391085496058 -0.763561323568315 -0.818301468617039 2.90669589065332 2.20420605143994 1.39461668399314 1.17801948783844 1.16236206857213 0.93570311242276 1.64112111495065 0.640227973926426 0.368230275417656 1.46046125846603 1.01688361642121 0.722824770566612 0.597356882550172 1.10233906508061 -0.736625696639578 1.62025903744875 -0.0495673649827938 -0.542329315536142 -1.1710973170037 0.0357425342650046 0.145696218874616 -0.196152116913298 0.109924006762083 -0.0315544961010055 0.856166592554564 0.746365264539773 0.928579862788537 0.957179416348517 1.11395298478444 -0.698691950572072 -1.73496825246459 -1.46932468572614 -1.26216145830261 -0.752265174750947 -0.0738219513888751 -0.357246073019467 0.649638107524067 0 0.0392941965205326 0.0379385872395926 -0.550065644657847 -4.35485507954382 -4.17944279888719 -4.19314277847187 0.412652837585649 0.407395963336628 0.310381356896855 0.816673343803945 1.0849606407751 1.71935242455372 0.717175367239281 1.11026328531328 1.64191903311144 0.803034343658348 1.13887994666877 0.343823306373891 0.926154806709349 0.225072726479492 -0.292452364488985 -0.167358089755879 0.533952864418988 0.366722829645259 -0.540740266360655 -0.591334754578571 -0.386819927399611 0.341638282089689 -0.053343057183985 -0.228206679166801 -0.227500436725618 -0.622221968626645
53939 -0.0507750968906056 -0.051899302843312 -0.343068644594267 -0.330889746773281 1.36199391343305 0.937484377308175 0.752042858056081 1.33446585700444 1.14093380224604 0.999802860619866 0.898566240902068 0.56730209384784 0.287489105895808 0.927671933017637 1.27814313877385 0.940249923951833 1.24443194960536 1.05740904731313 -0.137110366705281 1.21011181554583 -0.0886889426456286 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.63378284915472 -3.69844211302826 -3.7193971368246 0.122989621868346 0.000149711665272338 0.234946283628374 0.5955618292953 0.649068495539082 0.692742399867857 0.921614005231648 1.10226166833548 1.11058393804758 1.08635705122975 1.09761262215687 0.601534330600472 0.791905722108299 -0.330871881712063 0.0415427240948289 0 -0.586846179271287 -0.58908224342095 -0.108171002749034 -0.433252475504852 -0.168406409392991 -0.551012992272569 -0.582564302593967 -0.31969830402544 -0.49144873203428 -0.174241479419649
8518 -0.187306348352393 -0.180693583019356 -0.148574437116037 0.278421267245739 1.78912640119313 0.441303124206042 1.31948780724089 0.750591605639771 0.670284294073854 0.648896721625291 1.12887012311231 0.810729982939927 0.627367447062448 1.01581072953262 1.02837498366539 0.580095621738857 0.402656234238254 1.27398253494198 -1.13920447123536 0.69604573844984 0.0717062229350224 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.81567245722623 -4.09673641098928 -3.99487661906233 0.129574515559783 0.183047498998777 0.0126092360820697 1.00332106871577 1.1106430788895 1.47338626270163 0.0431308817215999 0.52424649059633 0.718305964756363 0.158338718758744 0.480451524376235 0.242416006480138 0.88780027376398 -0.332252914713889 -0.308198608984348 -0.368737131079385 -0.46127938101462 -0.600350950491416 -0.488473685868018 -0.495752121436282 -0.506852699957514 -0.610366047492758 -0.821105291817253 -1.09271737094279 -0.893672577387329 -0.916369130263796
[+] Show/hide bicluster #131 motif PSSM #1. bicluster 131 motif PSSM #1 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0 0.142857 0.857143 0
2 0 0.285714 0.714286 0
3 0 0 1 0
4 0 1 0 0
5 0.285714 0.142857 0.285714 0.285714
6 0 0 1 0
7 0 1 0 0
8 0.142857 0.428571 0.428571 0
9 0 0 0.142857 0.857143
10 0 0.857143 0.142857 0
11 0.142857 0 0.857143 0
12 0 0 1 0
13 0.714286 0.142857 0 0.142857
14 1 0 0 0 [+] Show/hide bicluster #131 motif PSSM #2. bicluster 131 motif PSSM #2 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0.444444 0.555556 0 0
2 0.111111 0 0.777778 0.111111
3 0 0 0.888889 0.111111
4 0.555556 0.333333 0.111111 0
5 0 0.777778 0 0.222222
6 0 0.444444 0.555556 0
7 0.777778 0.111111 0.111111 0
8 0 0 0 1
9 0 0 1 0
10 0 0 1 0
11 0 0.888889 0 0.111111
12 0 0.222222 0.666667 0.111111
13 0 0 1 0
14 0.777778 0 0 0.222222 |