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[+] Show/hide bicluster #133 rows and columns.
bicluster 133
Phaeodactylum tricornutum
28x74
[+] Show/hide bicluster #133 rows (genes).
bicluster 133 genes
Phaeodactylum tricornutum
28
[+] Show/hide bicluster #133 rows (short gene names).
bicluster 133 short names
Phaeodactylum tricornutum
28
short_name
[+] Show/hide bicluster #133 rows (long gene names).
bicluster 133 long names
Phaeodactylum tricornutum
28
long_name
[+] Show/hide bicluster #133 rows (NCBI RefSeq gene IDs).
bicluster 133 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #133 gene upstream sequences.
bicluster 133 upstream sequences
Phaeodactylum tricornutum
28
upstream
[+] Show/hide bicluster #133 columns (arrays; conditions).
bicluster 133 arrays
Phaeodactylum tricornutum
74
[+] Show/hide bicluster #133 ratios.
bicluster 133 ratios
Phaeodactylum tricornutum
28x74
GENES GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_5 GSE34988_Control_2 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_3 GSE34988_Dispersant_1 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_3 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Salinity_15ppt_4 GSE34988_Silver_1 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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50520 0.0835898306914892 0 0.113986132761122 -0.170029314702007 0.0370454931473646 2.4668926346384 2.00666412477096 0.97493764177247 1.40706856991428 1.88232900103958 1.61203938372977 1.39403615540192 0.547940839027109 0.903435090575857 1.30127519044536 0.689920066225483 1.706372407434 1.08946520866421 -0.73018091820115 1.13162582951923 0.0910796694983346 0.0810393909709591 -0.773640506977313 -0.419811949034869 -0.512758036969879 0.216642118966658 0.21687687340708 0.0830454842151818 1.0842285185455 0.307123356518575 -0.125284883261265 0.0697791796572455 0.419039586598354 -0.239989634472246 0.919169687898096 0.746424202387947 -0.357126842632216 -3.60891877744435 -3.79988389806696 -3.89607346231404 -0.455285054606441 0.248691544670121 -1.08630104527108 -0.588366122188248 -1.79055737482453 0.522004657609799 0.974650398601762 -1.06366598574582 0.0386795840780908 0.566571081623644 0.553524163356243 0.185062817617952 0.175006587866793 0.155660847140294 -0.0321758699824125 -0.347002408726613 -0.577058438550039 -0.128229195910341 -0.653376989374647 -1.84259389436615 -0.727324115809874 -0.99707100551216 -1.02860897141851 -1.75950518915361 -0.769224022853009 -1.09943527382292 -1.63529852893389 -1.57635908198727 -1.16799210174375 -1.05787588763012 -1.11064289101787 -0.363823800591546 -0.786553828889366 -1.192756272562
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54375 0.00933957796686849 -0.279994449654307 -0.419372561884723 -0.0391938718276513 0.095828674395564 2.13610957026707 1.38162909314407 1.12318847298825 1.49067691037149 1.3976793538806 1.27792306651262 1.22664561013357 0.095029116921385 1.25124211359994 0.750473356396375 0.779425425869952 1.30434579658345 1.4259780884531 -0.26809442109892 1.11185777913238 0.482970047827003 0.203009820477038 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.19048977993129 -2.27773603670437 -2.21407661863288 -0.312054733109381 0.344411187949115 -0.763010428211559 -0.754259971306328 -0.552811580153702 0.985509278296426 0.582197810397509 -0.247699747209878 0.214979666214129 0.279790261720044 0.508814761752337 0.279790261720044 0.493061897121235 0.0330070358609842 0.168605892375173 0.123679188417067 -0.42467725803506 0.115837763682526 -0.714584587437816 -1.17048162367364 -0.984282155151398 -1.51689351812682 -0.450462747276939 -0.815344396813671 -0.985895409243598 -1.05671891951075 -2.01915461061245 -2.09219592302135 -1.97433753056248 -0.792427518319771 -0.705165964539709 -1.13363939109851 -0.681931843874852 -0.775612550762365
[+] Show/hide bicluster #133 motif PSSM #1. bicluster 133 motif PSSM #1 Phaeodactylum tricornutum 20x4
POSITION A C G T
1 0 0.545455 0.454545 0
2 0 0 0 1
3 0 0 1 0
4 0.090909 0.454545 0.090909 0.363636
5 0.636364 0.090909 0.272727 0
6 1 0 0 0
7 0.272727 0.272727 0.272727 0.181818
8 0.727273 0.090909 0.181818 0
9 0.727273 0 0.272727 0
10 0.909091 0.090909 0 0
11 0 0.545455 0.454545 0
12 0 0 0.090909 0.909091
13 0.363636 0.272727 0.181818 0.181818
14 0.909091 0.090909 0 0
15 0.090909 0.272727 0.636364 0
16 0.818182 0 0 0.181818
17 0.636364 0 0.363636 0
18 0.545455 0.181818 0 0.272727
19 0 0 1 0
20 0.272727 0 0.727273 0 [+] Show/hide bicluster #133 motif PSSM #2. bicluster 133 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.769231 0 0.153846 0.076923
2 0.846154 0 0.076923 0.076923
3 0.230769 0.461538 0.307692 0
4 0.692308 0.076923 0.153846 0.076923
5 0.846154 0 0.153846 0
6 0.153846 0.538462 0.153846 0.153846
7 0.076923 0 0.384615 0.538462
8 0.461538 0 0 0.538462
9 0.076923 0.307692 0.615385 0
10 0.384615 0.153846 0 0.461538
11 0.769231 0 0 0.230769
12 0 0 0.769231 0.230769
13 0.153846 0.076923 0.769231 0
14 0.307692 0 0.230769 0.461538
15 0.461538 0.384615 0.153846 0
16 0.846154 0.153846 0 0
17 0.769231 0 0.230769 0
18 0.076923 0 0.846154 0.076923
19 0 0.153846 0.076923 0.769231
20 0 0.076923 0.923077 0
21 0.923077 0 0 0.076923
22 0 0.076923 0.076923 0.846154
23 0 0.153846 0.153846 0.692308
24 0.692308 0.076923 0.153846 0.076923 |