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[+] Show/hide bicluster #200 rows and columns.
bicluster 200
Phaeodactylum tricornutum
24x79
[+] Show/hide bicluster #200 rows (genes).
bicluster 200 genes
Phaeodactylum tricornutum
24
[+] Show/hide bicluster #200 rows (short gene names).
bicluster 200 short names
Phaeodactylum tricornutum
24
short_name
[+] Show/hide bicluster #200 rows (long gene names).
bicluster 200 long names
Phaeodactylum tricornutum
24
long_name
[+] Show/hide bicluster #200 rows (NCBI RefSeq gene IDs).
bicluster 200 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #200 gene upstream sequences.
bicluster 200 upstream sequences
Phaeodactylum tricornutum
23
upstream
[+] Show/hide bicluster #200 columns (arrays; conditions).
bicluster 200 arrays
Phaeodactylum tricornutum
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[+] Show/hide bicluster #200 ratios.
bicluster 200 ratios
Phaeodactylum tricornutum
24x79
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_2 GSE34988_Cadmium_3 GSE34988_Control_1 GSE34988_Control_6 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_4 GSE34988_Silver_1 GSE34988_Simazine_4 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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43763 -0.138326046563691 0.306259257163191 0.00158643938991105 -0.529010638488775 -0.970537745801371 2.8903320131062 1.17405689442661 1.0279553834796 0.210453608994635 -0.306240143435602 0.672837615852663 1.38284760912098 0.803609917273067 -0.0616761761851205 0.0395080749270621 0.724154151684389 -0.066076156276175 2.08494834191284 -0.616123363349723 1.21705131326596 0.0707743105176225 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.0366404446394453 0.536154347129179 -1.15288910182196 -1.1644556998279 -0.997671244928428 -1.17810405723789 -1.00042413454253 -1.42534472286584 -1.71638313708527 -1.00922939764788 -1.13282986374245 -0.847300013331658 -0.733639930433325 -0.566710453832646 -0.139388673194382 -2.09241760187736 -1.40330201555928 0.326965989024618 0.310607963113839 -1.08007034800256 -1.71908360001777 -1.88942316561603 0.0508731045899717 -1.35925293020496 -1.76502077785703 -1.83592212046788 1.31778462081348 -0.248932338360492 0.00547809283019575 -1.19944947472038 -1.37782621485616 -1.73838603619987
44863 0.464045243886866 0.76867845047609 0.425958414266918 0.722482811969315 0.161500669889703 1.54427127721226 0.874911218537973 1.35893339263715 0.407121405501336 0.898294074709807 0.730358185448795 1.19104419045761 0.794670868780594 -0.389910620488639 1.23751257980876 0.893259241555531 0.684656447119672 1.38374389061603 -0.0498714056417487 0.67821608709168 0.116445179056712 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.00171273161786624 0.666051627784219 -0.927396119369877 -1.12931312826566 -0.673016673358862 -0.551512337396974 -1.11670977456862 -0.694600243340943 -1.3372411434273 -0.195138987364419 -0.805737861527261 -0.26581025334962 0.3118558810022 -0.445832182970949 -0.157016933021056 -1.64029792121668 -1.38552403703978 0.508117994692154 0.649261706665568 -1.09911200856846 -1.01755301708975 -0.795915389669609 0.165444978554583 -0.942496194686048 -1.18929209084329 -0.820244812849853 0.405365964937371 -0.515868461449959 -0.0820653707070223 -1.05071937418715 -1.26951586983557 -0.999391937992319
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46130 0.0202228800981521 0.321038221558164 0.222170807744976 0.0719035736823185 0 2.65427548274923 1.73410915968319 1.21120165501192 0.609514797424956 0.539962133554048 0.893137882068192 1.40114224760047 1.19716079701044 -0.136953837998041 -0.0711087021451272 0.455961345346349 0.200459298972932 1.83470956197146 -0.652131708498465 0.85080184432938 -0.0794000829853696 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.519056857900406 0.315668520909051 -0.899782880834802 -0.916451122161561 -0.598715416097121 -2.00664087339252 -2.14740117147617 -1.84184392495365 -2.37865360254383 -0.432088756711072 -1.00071331483072 -0.799549155044631 -0.674765792660866 -0.834471090841129 -0.360972630637788 -3.62415049152467 -2.06221822378534 0.52859962647846 0.59204123222238 -1.03364759718818 -0.923037062118373 -0.896820785518571 0.272254537132619 -1.0301671869953 -0.924836949268509 -1.00815810984951 -0.40932974859088 -0.0734451879534728 -0.163749663347304 -2.30860083293431 -2.25871672267236 -2.02465811982115
46782 0.254509911610202 0.188405190491743 0.313269663715499 0.584217409534369 0.869038985711434 2.03583219937399 0.430372953015347 1.71380019406857 0.817399773010563 1.50138369020792 0.889486563336409 1.12108159739809 1.4731708481207 -0.343782700433601 0.321251196709802 0.464253662857728 0.580724468714776 1.68660340602817 -0.996464808019869 0.51065754486755 -0.290796910080317 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.122044703561499 0.126834755414534 -0.746395734187426 -0.911517524131005 -0.666595752246029 -1.2503166301403 -1.74931960380841 -1.52402258343904 -2.61852434911073 0.0320816560018783 -1.07877435587131 -0.531961254820299 -0.150995295269852 -0.907913765793163 -0.651558486541209 -2.37954086706381 -1.79948617504906 -0.150570204337698 0.0541523906645803 -0.839198555945833 -0.660335510696364 -0.508006284411458 -0.117557576064843 -1.2941852287029 -0.713976835084098 -0.704042683858817 0.521527350406189 -0.415934917373078 -0.608806236000607 -1.55877553514514 -1.84952026103323 -1.46945342224884
47170 0.357317583507599 0.92074372923161 0.678767466944053 1.12340146316129 0.180384205897164 2.02355734169317 1.47423148948984 1.20999843045843 0.705826143534168 1.18401892198707 1.42213862223783 0.880747583682888 0.871900914802366 -0.46338977080838 0.430370572632097 0.309441000998638 0.508969983948354 1.0799963175475 0 0.791122253137761 -0.180735562959085 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.271897971816207 0.803976646504494 -1.60257978165373 -1.8371167747871 -1.86123919748902 -0.846734303112647 -1.19467357486389 -1.80230179667212 -2.10960127082198 0.326612733993472 -0.3680363966514 -0.0396473301279066 0.0668955520885532 -0.251881076767947 -0.0901629133023226 -2.56348693800678 -1.96462637093074 0.75684900770597 0.689866453576237 -1.80858784236362 -1.23003563498588 -1.83233062252517 0.395753224272501 -2.15881713680367 -1.57231071669002 -1.58477452522309 0.360154595522423 -0.227116504481723 0.128050372075068 -1.8371167747871 -1.81212946926157 -1.68990796125699
47890 0.217931959376001 0.0797293515425793 0.0072502271615808 -0.175623401695678 0.036158086018742 1.68228259228169 0.592889931249572 0.916337450275493 0.0171585005234919 0.139840939786427 0.417691548396128 0.693057756962017 0.256993179963644 -0.0496333168432173 0.0710171932101928 0.578714606547659 0.0897339844340142 1.26544802574048 -0.49134330540826 0.852000706139261 0.0874402086768699 2.06834343383673 2.5508780223797 2.41569691422857 1.74521662446233 1.69765858814306 -0.0774809380813445 0.425533590650775 0.019622769804722 -0.132334563858103 0.0510639835362372 0.226613673333988 0.560322620255366 -1.11916015163125 0.134687037232134 -0.430120388047007 1.76325984162706 1.86015175755155 1.92286463413806 2.16651075192536 1.82704251846852 0 0.031203457066277 -0.502917708352672 -0.661091980804725 -0.59311322351152 0.998761506535069 0.405569328383113 0.0897488529263931 -0.414483113909506 -0.785707320098219 -0.686347813593944 -1.39157504088988 -0.975377932068287 -1.17152888468838 -1.45027368933182 0.150868644632622 -0.182428766691755 0.349251596295194 0.0140901533875497 0.0503746689941622 -0.00855751969562301 -2.24105840424856 -1.46985123643845 0.145497904762869 0.0568892155580254 -0.786124175424567 -0.505381579402007 -0.854521902271536 -0.222710113679861 -0.510792345469205 -0.763694791856565 -0.915315989671108 1.26315197961911 0.086569742113653 -0.156967336239015 -0.613883553384543 -0.551502895547861 -0.61209901362839
48308 0.391227777224264 0.504140108535451 0.256297541307395 0.142291371786631 0.222035705775157 2.11356566236642 1.55794383964205 1.0499879575807 0.570680756781275 0.91643948631825 1.26920301460894 0.812886175868619 1.02763131598108 0.0535126398890686 0.114468361947413 0.616682651961594 0.7534180737753 1.21570797484199 -0.285390899733177 0.926531025929188 -0.123295368306978 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.50525992270271 0.29839258984998 -1.30724683794026 -1.62263717472215 -1.46236819332459 -1.23965042075902 -1.1748297792423 -3.08872004558106 -2.84552836915179 0.148100378529713 -0.173089339555751 0.193525917400778 -0.022371403796672 -0.10156024905033 -0.0506503586964458 -2.74506385498777 -1.98080084873657 0.356113024487027 0.439233981648959 -1.71627673913474 -1.40830202784506 -1.39568126820101 -0.0655211058854055 -1.57411088085923 -1.4932073846848 -1.60896592730309 1.23873838114944 0.103385713509093 0 -1.20284278005826 -1.21840236776253 -1.2094456804333
54635 0.726972029044226 0.944757338276151 0.78561850160168 0.556943926908157 0.570477728267569 1.46206589451345 1.0242427537084 1.51901519726825 0.718770856542291 1.26059426055235 1.11525756785045 1.17710003982088 1.18133751969479 -0.153734649786817 0.994029708880523 1.05683588084431 0.846280266074205 1.2462507645254 0 0.781966708648666 0.283094456642526 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.661507370230237 0.581365021533113 -0.74655356829684 -1.43150983611111 -0.862056914483677 -0.665373206439366 -0.559629958690338 -1.2025559985822 -2.06855273588377 -0.417262404960313 -0.878384327308104 -0.402502495837243 -0.0810637915124291 -0.570386803075628 0.156033790035796 -1.0100263415626 -1.61428051274324 0.626126662168031 0.589791188714389 -0.777409038015074 -0.116390956998114 -0.503954641633409 0.231808752280316 -0.793557209478051 -0.863006870035109 -1.10718438874275 -0.184685125452084 -0.147868310118926 -0.236189643845459 -1.39434122330794 -0.94630571480039 -1.19181298371388
6454 0.219106771139118 0.0830181205358674 0.258107786860782 0.282172243369893 0.799143153893218 1.22627895884149 0.146241256447219 1.11448711122399 0.748865035966078 0.632899249857515 0.830451841620417 1.159321683127 0.836003262794415 -1.06001037129312 1.30989879616643 0.338333706009088 0.770448364028215 0.920004812188117 -1.1292413232433 0.0820057537447944 -0.0782552285174363 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.088518955361554 0.383826921527442 -1.12195366856266 -0.298556326682788 -0.0496807605407864 -1.34882678780069 -0.597972848395701 -2.61309964139811 -2.16035936265311 -1.68203891629867 -1.16112607128497 -0.73008527818769 -0.419406578846558 -0.323975780762207 0 -2.4236688438434 -0.922347289015043 -0.0731858737196533 0.0991457346908681 -1.32449996234636 -0.328357090489344 -0.836882804168943 -0.125439963528197 -0.754590425806715 -0.91340508891468 -0.623425874542061 -0.088239293828614 -0.172478951596794 -0.108740917117982 -1.51208982098979 -1.10094506598898 -0.76532648463522
[+] Show/hide bicluster #200 motif PSSM #1. bicluster 200 motif PSSM #1 Phaeodactylum tricornutum 18x4
POSITION A C G T
1 0 0 0 1
2 0 0 0 1
3 0 0.857143 0 0.142857
4 0 0 0 1
5 0 0 0 1
6 0 0.428571 0 0.571429
7 0 0.714286 0.142857 0.142857
8 0.142857 0.714286 0.142857 0
9 0 0.714286 0 0.285714
10 0 0.428571 0.142857 0.428571
11 0 0 0 1
12 0 0.142857 0.142857 0.714286
13 0 0.571429 0.142857 0.285714
14 0 1 0 0
15 0.428571 0 0.142857 0.428571
16 0.428571 0.571429 0 0
17 0 0 0 1
18 0 0 1 0 [+] Show/hide bicluster #200 motif PSSM #2. bicluster 200 motif PSSM #2 Phaeodactylum tricornutum 23x4
POSITION A C G T
1 0 0.666667 0 0.333333
2 0.166667 0 0.166667 0.666667
3 1 0 0 0
4 0.333333 0.666667 0 0
5 0.166667 0.833333 0 0
6 0 0 0 1
7 0 0.166667 0.833333 0
8 0 0.333333 0.166667 0.5
9 0.833333 0.166667 0 0
10 0.666667 0 0.333333 0
11 0.833333 0 0 0.166667
12 0 1 0 0
13 0.5 0.5 0 0
14 0.833333 0 0.166667 0
15 0.333333 0.5 0.166667 0
16 0.333333 0 0 0.666667
17 0.5 0 0.5 0
18 0 1 0 0
19 0 0 0 1
20 0.5 0.166667 0 0.333333
21 1 0 0 0
22 0 0.833333 0.166667 0
23 0.833333 0 0 0.166667 |