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[+] Show/hide bicluster #218 rows and columns.
bicluster 218
Phaeodactylum tricornutum
21x80
[+] Show/hide bicluster #218 rows (genes).
bicluster 218 genes
Phaeodactylum tricornutum
21
[+] Show/hide bicluster #218 rows (short gene names).
bicluster 218 short names
Phaeodactylum tricornutum
21
short_name
[+] Show/hide bicluster #218 rows (long gene names).
bicluster 218 long names
Phaeodactylum tricornutum
21
long_name
[+] Show/hide bicluster #218 rows (NCBI RefSeq gene IDs).
bicluster 218 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #218 gene upstream sequences.
bicluster 218 upstream sequences
Phaeodactylum tricornutum
21
upstream
[+] Show/hide bicluster #218 columns (arrays; conditions).
bicluster 218 arrays
Phaeodactylum tricornutum
80
[+] Show/hide bicluster #218 ratios.
bicluster 218 ratios
Phaeodactylum tricornutum
21x80
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_3 GSE34988_Control_1 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_2 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Oil_4 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_5 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2
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[+] Show/hide bicluster #218 motif PSSM #1. bicluster 218 motif PSSM #1 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 0.846154 0.153846 0
2 0.076923 0 0.769231 0.153846
3 0 0.923077 0 0.076923
4 0.615385 0 0 0.384615
5 0.076923 0 0 0.923077
6 0 1 0 0
7 0 0 1 0
8 0.538462 0.230769 0.076923 0.153846
9 0.153846 0.230769 0 0.615385
10 0 0.923077 0.076923 0
11 0.153846 0.307692 0.538462 0
12 0.384615 0.153846 0.230769 0.230769
13 0.153846 0 0.153846 0.692308
14 0 1 0 0
15 0.076923 0.461538 0.461538 0 [+] Show/hide bicluster #218 motif PSSM #2. bicluster 218 motif PSSM #2 Phaeodactylum tricornutum 23x4
POSITION A C G T
1 0 0.875 0.125 0
2 0.25 0 0 0.75
3 0 0 0.125 0.875
4 0 0 0.25 0.75
5 0 0.5 0.5 0
6 0.25 0.125 0.625 0
7 1 0 0 0
8 0.25 0.125 0.5 0.125
9 0.625 0 0.375 0
10 0 1 0 0
11 0 0 1 0
12 0.5 0.125 0 0.375
13 0.625 0 0.125 0.25
14 0 0.5 0.5 0
15 0.125 0.5 0.125 0.25
16 0 1 0 0
17 0 0 0.25 0.75
18 0 0 0 1
19 0.125 0 0.25 0.625
20 0.125 0.375 0.125 0.375
21 0 0.375 0 0.625
22 0.25 0.125 0.375 0.25
23 0 0.375 0.625 0 |