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[+] Show/hide bicluster #238 rows and columns.
bicluster 238
Phaeodactylum tricornutum
29x83
[+] Show/hide bicluster #238 rows (genes).
bicluster 238 genes
Phaeodactylum tricornutum
29
[+] Show/hide bicluster #238 rows (short gene names).
bicluster 238 short names
Phaeodactylum tricornutum
29
short_name
[+] Show/hide bicluster #238 rows (long gene names).
bicluster 238 long names
Phaeodactylum tricornutum
29
long_name
[+] Show/hide bicluster #238 rows (NCBI RefSeq gene IDs).
bicluster 238 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #238 gene upstream sequences.
bicluster 238 upstream sequences
Phaeodactylum tricornutum
28
upstream
[+] Show/hide bicluster #238 columns (arrays; conditions).
bicluster 238 arrays
Phaeodactylum tricornutum
83
[+] Show/hide bicluster #238 ratios.
bicluster 238 ratios
Phaeodactylum tricornutum
29x83
GENES GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_2 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Control_1 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Oil_4 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_2 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2
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[+] Show/hide bicluster #238 motif PSSM #1. bicluster 238 motif PSSM #1 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0.642857 0.071429 0.214286 0.071429
2 0 0.214286 0 0.785714
3 0 0 0 1
4 0 0.071429 0.928571 0
5 1 0 0 0
6 0 1 0 0
7 0.214286 0 0 0.785714
8 0 0 1 0
9 0 0 0 1
10 0 0 1 0
11 1 0 0 0
12 0.571429 0 0.214286 0.214286
13 0.357143 0.214286 0 0.428571
14 0.071429 0 0.714286 0.214286 [+] Show/hide bicluster #238 motif PSSM #2. bicluster 238 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0.071429 0.571429 0 0.357143
2 0 0.071429 0.928571 0
3 0.142857 0.214286 0.285714 0.357143
4 0.071429 0 0.928571 0
5 0 0 0 1
6 0 0 0 1
7 0 0.714286 0.285714 0
8 0 0 0.928571 0.071429
9 0.071429 0.5 0.285714 0.142857
10 0.285714 0 0.285714 0.428571
11 0 0 0 1
12 0 0 0.071429 0.928571
13 0 0.785714 0 0.214286
14 0.214286 0.071429 0.571429 0.142857
15 0.071429 0.714286 0.142857 0.071429 |