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[+] Show/hide bicluster #244 rows and columns.
bicluster 244
Phaeodactylum tricornutum
30x83
[+] Show/hide bicluster #244 rows (genes).
bicluster 244 genes
Phaeodactylum tricornutum
30
[+] Show/hide bicluster #244 rows (short gene names).
bicluster 244 short names
Phaeodactylum tricornutum
30
short_name
[+] Show/hide bicluster #244 rows (long gene names).
bicluster 244 long names
Phaeodactylum tricornutum
30
long_name
[+] Show/hide bicluster #244 rows (NCBI RefSeq gene IDs).
bicluster 244 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #244 gene upstream sequences.
bicluster 244 upstream sequences
Phaeodactylum tricornutum
29
upstream
[+] Show/hide bicluster #244 columns (arrays; conditions).
bicluster 244 arrays
Phaeodactylum tricornutum
83
[+] Show/hide bicluster #244 ratios.
bicluster 244 ratios
Phaeodactylum tricornutum
30x83
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_5 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_5 GSE34988_Salinity_15ppt_2 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_6hr_1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep3
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12820 0.246911993071153 -0.0976629325179549 0.118382639383744 -1.36768149846386 -2.35721219972334 -1.91867198257035 -2.00435391252096 -1.75326633014534 -0.445454321329994 -2.0402549382733 -1.57940292954678 -1.32139478423267 -1.38080570181526 -1.48566046525437 -0.760099346165963 -1.16629085638712 0.171360630520476 0.537556260203483 0.0299557357991055 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.47259570986729 2.93830234579894 2.74865028001599 -0.170884682948623 -0.793272940888191 0.987679022669655 0.187579258399022 0.66792715836804 0.596458508354204 -1.18995223264052 -1.62426448229681 0.246389219666111 0.740371328037157 -0.320365756288856 -0.0363170390913724 -0.855864710476775 -0.92811663811967 -0.534789493230137 0.457347820025924 -0.566887458596592 -0.527588744453302 0.566621002978039 0.461309361982885 0.124947362815785 -0.728261147399141 -0.721459081677857 0.432760250060429 0.105278374626697 0.567769901104325 -0.735887034650292
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31878 0.592140548264232 -0.337562894249346 -0.284945807820629 -0.293372636585597 -1.72589709941657 -1.33249533406179 -1.47104421756497 -1.50690478570023 0.439449810916279 -1.36740069970496 -0.99427674996617 -0.169018224013602 0 -1.2900050130365 -0.591646757145438 -0.556324502279021 0.558153957899467 0.664804744622291 0.555130499163909 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3.17637531386312 3.45769659659376 3.2068882736687 -0.891683253757966 -0.62970123128138 1.11851485736136 0.909925881708548 1.14629908057402 1.17591200102537 -1.20750150289203 -1.24801903776261 1.22244861142831 1.75064305917792 0.480316429517059 1.23892309280897 0.00949269730952095 0.11922574574731 -0.0618298784440407 0.863993101103328 -0.22585860796632 -0.23946387219928 0.389048728782713 0.531158732036567 0.372971578946844 -0.428149168282021 -0.573895304690612 0.785355091627401 0.653626327060711 0.929702221704582 -0.744006744055613
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50056 0.105413548177721 0.139466648436731 0.354282822251086 -1.55014321069273 -2.72472681243119 -2.5182114018529 -2.13115311069839 -2.06311091976732 0.145035482501644 -2.08989253094847 -2.14089793021612 -1.25843360026345 -0.626804918895333 -1.6600681545589 -0.657071211990201 -1.14945087751722 0.385063752425057 0.438296685318671 0.403653416667955 -1.15816953118229 -1.48882756706158 -1.67999079028588 -1.42930441205809 -2.22715562119012 0.619195730599006 0.691624703354641 0.180278695088187 0.465344399715082 0.0960339110347099 -0.0714752785573217 0.0522102926890016 -0.161744516915644 -0.228105163195537 0.297099181805362 -0.0436240031686036 -0.534595880245933 -1.20398874569583 -1.27450836368033 -0.224966952374074 -1.17316646532869 0.277881048394308 0.557825950219592 0.764642205856558 0.971433523358447 -0.263491480735439 0.226147289157487 -0.0152328197158542 0.117852303336173 0.122220586390113 0.203932047658449 0.407906702658358 0.0719957328276862 0.408804104265522 3.10656450061426 3.30090130713039 3.39078122387589 -1.09632168833747 -1.53661373615056 1.79536021114861 1.45131392653291 1.53320068588292 -0.248104852772786 -2.16583986482355 -2.301482180956 0.69484686272201 0.493838116651525 0.159226648239464 0.237962880514675 0.0921814192395478 0.00383032363300862 -0.381177951119201 0.459561458589063 -0.897667780841048 -0.771017588778621 0.439306657168821 0.45772003217579 0.255010311952322 -1.37503085854386 -1.41851553401736 1.22415836945358 1.02200992642682 1.24949669891304 -1.34518950789266
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50526 0.47643134615735 0.664859497887889 0.785034244075671 -0.744921906462629 -2.04435705502352 -1.14065515179953 -1.28242722559834 -1.15037638684612 0.299043182773352 -1.86635704861127 -1.34826982335247 -0.251903182011033 -0.164307248861784 -0.948253676817754 -0.0626145498463296 -0.574432212281702 0.250132304837087 0.0774219373543948 -0.0541998799915584 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3.51833811952275 3.49728659875794 3.46304672276654 0.317312481425611 -0.0971537041585576 0.398407944882026 0.527346957478188 0.606079098559087 0.609058843733711 -1.4705565667167 -1.64370617888277 0.930488948562756 0.399804588709752 0.0215527878798015 -0.11527533502715 -0.0618211049949728 0.231017429434244 0.454749109793296 0.747250759542671 -0.377831152891953 -0.417436625640137 0.734715807165374 0.565788658714383 0.584387101297305 -0.438136643907771 -0.423326092535404 0.132506456386949 -0.196380758636352 0.0414930634052225 0.0737473877211534
51806 0.114425104214051 -0.13350657504284 -0.047193911002474 -0.973259282600671 -2.16894456259449 -1.4481643043025 -1.37653637874149 -1.71537440946049 0.428400453452432 -1.78393794580826 -0.652471604978969 -0.787640712543929 -0.156608246465188 -1.50583159091471 -0.696554784398244 -0.853927679967682 0.497184116057486 0.302633054192003 0.397067218566906 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3.34504217761243 3.31105249912654 3.38623674344506 -0.179096266330764 -0.535777239924502 1.47339883483664 1.4363601770419 1.36132172785695 0.598610970747659 -1.40336916481373 -0.87728511720923 0.888643770946127 0.964743965424568 -0.866098661293537 -0.248431689160797 -1.1975207184215 -0.948226097978132 -0.589754536143594 0.894463883913777 -0.550176812004135 -0.493308206313867 0.863731294488659 0.72388580915853 0.616705015131724 -0.594135151091439 -0.493308206313867 1.23985207244434 0.893306835808201 0.870639589480048 -0.440393129378405
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9777 1.29412414789449 1.37883129405525 1.15071173271727 -1.45277580756298 -2.30811425773888 -1.84030027882487 -2.3481491067234 -1.81382661504374 0.752030579736358 -1.17378906883429 -1.79445119566242 -1.20925884598616 -0.383463353336776 -0.768384956278344 -0.708304536439705 -1.57869726930037 1.46080422220702 0.568079361667071 0.898056585657469 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.34748988348385 2.32476532249545 2.44383169786032 -0.780349408797082 -0.50568596001611 1.61736739780227 1.1398342003404 1.5975577844067 0.0488132015320997 -0.189218827861616 -0.651314978845552 0.731372240240296 0.401920896017003 0.104681691527987 -0.110459831288985 0.00654388923413617 0.00637416859868001 0.176419920016459 0.716804485211503 -0.322809654328253 -0.42725182469387 0.246542137143501 0.636295570422589 0.209868404477798 -0.60817478321622 -0.714187295696721 0.462567409500972 0.275888745087593 0.579366908592771 -1.03415378190621
[+] Show/hide bicluster #244 motif PSSM #1. bicluster 244 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.541667 0.041667 0.416667 0
2 0 0.541667 0 0.458333
3 0 0 0 1
4 0.375 0 0.541667 0.083333
5 0.958333 0 0.041667 0
6 0.041667 0.916667 0.041667 0
7 0.083333 0 0 0.916667
8 0 0 1 0
9 0 0 0 1
10 0.416667 0 0.5 0.083333
11 0.916667 0.041667 0.041667 0 [+] Show/hide bicluster #244 motif PSSM #2. bicluster 244 motif PSSM #2 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0.647059 0 0.352941
2 0 0.058824 0 0.941176
3 0 1 0 0
4 0.823529 0 0.176471 0
5 0.058824 0.823529 0.117647 0
6 0.647059 0 0 0.352941
7 0 0 0.941176 0.058824
8 0 0 0 1
9 0 1 0 0
10 0.882353 0.058824 0.058824 0
11 0.529412 0.235294 0 0.235294 |