PHATRDRAFT_10835 translation initiation factor if-2 (IF-2)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_10835 chr_4 translation initiation factor if-2 (IF-2) 668070 669926 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0209
Normalized Mean Residue
Phatr_bicluster_0200
0.32
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IF2_eIF5B Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family; IF2/eIF5B contribute to... cl17170 268.571 1.19E-86 82 - 244 specific 206674
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 268.571 1.19E-86 82 - 244 superfamily 266525
IF2_mtIF2_II This family represents the domain II of bacterial Initiation Factor 2 (IF2) and its eukaryotic... cl02787 136.075 2.85E-38 255 - 350 specific 239673
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 100.253 2.27E-25 493 - 576 superfamily 261449
mtIF2_IVc mtIF2_IVc: this family represents the C2 subdomain of domain IV of mitochondrial translation... cl02787 100.253 2.27E-25 493 - 576 specific 239663
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 100.253 2.27E-25 493 - 576 superfamily 261449
IF-2 superfamily Translation-initiation factor 2; IF-2 is a translation initiator in each of the three main... - 89.0431 4.60E-21 372 - 476 superfamily 256778
IF-2 superfamily Translation-initiation factor 2; IF-2 is a translation initiator in each of the three main... - 89.0431 4.60E-21 372 - 476 superfamily 256778
IF2_N superfamily Translation initiation factor IF-2, N-terminal region; This conserved feature at the N-terminus of... - 39.3643 0.000204435 5 - 54 superfamily 252785
IF2_N superfamily Translation initiation factor IF-2, N-terminal region; This conserved feature at the N-terminus of... - 39.3643 0.000204435 5 - 54 superfamily 252785
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
29049 Not available 266952 294531 419681 Cre07.g341850.t1.2 AT1G17220.1 317138
KEGG description KEGG Pathway
Not available Not available
Not available -
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