PHATRDRAFT_11318 3-hydroxyisobutyrate dehydrogenase (MmsB)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11318	chr_5	3-hydroxyisobutyrate dehydrogenase (MmsB)	900785	901756	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0115	0.43	0.00000000089 20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
F420_oxidored superfamily		NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent.	-	76.7224	3.58E-17	37 - 194	superfamily	267479
NAD_binding_11 superfamily		NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; 3-Hydroxyisobutyrate is a central...	-	72.509	5.28E-16	197 - 320	superfamily	258970
MmsB		3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	-	141.186	2.89E-39	37 - 321	multi-dom	224995

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
17039		Not available	212829	247447	Not available	Not available	AT1G18270.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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