PHATRDRAFT_11652 translation initiation factor if-3 (infC)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11652	chr_6	translation initiation factor if-3 (infC)	203958	204515	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0237

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
IF3_C superfamily		Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, C-...	-	118.295	2.07E-34	101 - 185	superfamily	250071
IF3_C superfamily		Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, C-...	-	118.295	2.07E-34	101 - 185	superfamily	250071
IF3_N superfamily		Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, N-...	-	95.6033	7.81E-26	15 - 95	superfamily	191228
IF3_N superfamily		Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, N-...	-	95.6033	7.81E-26	15 - 95	superfamily	191228
infC		translation initiation factor IF-3; Reviewed	-	214.257	1.16E-70	14 - 186	multi-dom	234582

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	153344	308126	315812	Cre01.g001550.t1.1	AT2G24060.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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