PHATRDRAFT_11965 pseudouridinesynthase homolog 1 (PseudoU_synth superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11965	chr_7	pseudouridinesynthase homolog 1 (PseudoU_synth superfamily)	717674	718336	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0191

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0124	0.32	19000 62000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PseudoU_synth superfamily		Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...	-	244.661	7.53E-82	3 - 184	superfamily	260207

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37374		Not available	163062	133847	44604	Cre16.g690250.t1.2	AT5G14460.1	309818

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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