PHATRDRAFT_12898 prp18 pre-mrna processing factor 18 homolog (Prp18)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12898	chr_9	prp18 pre-mrna processing factor 18 homolog (Prp18)	687599	688117	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0293

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Prp18 superfamily		Prp18 domain; The splicing factor Prp18 is required for the second step of pre-mRNA splicing. The...	-	203.231	6.32E-67	20 - 161	superfamily	251567
Prp18 superfamily		Prp18 domain; The splicing factor Prp18 is required for the second step of pre-mRNA splicing. The...	-	203.231	6.32E-67	20 - 161	superfamily	251567

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35907		Not available	163673	156609	438550	Cre13.g567750.t1.2	AT1G03140.1	489594

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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