PHATRDRAFT_13057 transcriptional co-repressor sin3a isoform 5 (PAH)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13057	chr_10	transcriptional co-repressor sin3a isoform 5 (PAH)	840204	841307	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0411

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0235	0.24	1000 1900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PAH superfamily		Paired amphipathic helix repeat; This family contains the paired amphipathic helix repeat. The...	-	64.8054	9.73E-15	110 - 156	superfamily	251462
PAH superfamily		Paired amphipathic helix repeat; This family contains the paired amphipathic helix repeat. The...	-	64.8054	9.73E-15	110 - 156	superfamily	251462
PAH superfamily		Paired amphipathic helix repeat; This family contains the paired amphipathic helix repeat. The...	-	64.8054	9.73E-15	110 - 156	superfamily	251462
PAH superfamily		Paired amphipathic helix repeat; This family contains the paired amphipathic helix repeat. The...	-	64.8054	9.73E-15	110 - 156	superfamily	251462

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
27435		Not available	157073	295691	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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