PHATRDRAFT_13417 signal recognition (SRP54_euk)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13417 chr_11 signal recognition (SRP54_euk) 731237 732932 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0239

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SRP54 SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54... cl18944 298.699 9.79E-99 114 - 309 specific 249866
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 298.699 9.79E-99 114 - 309 superfamily 267297
SRP_SPB superfamily Signal peptide binding domain; Signal peptide binding domain. - 102.198 4.25E-26 340 - 447 superfamily 251653
SRP_SPB superfamily Signal peptide binding domain; Signal peptide binding domain. - 102.198 4.25E-26 340 - 447 superfamily 251653
SRP54_N SRP54-type protein, helical bundle domain; This entry represents the N-terminal helical bundle... cl03758 56.4056 4.41E-10 10 - 98 specific 214941
SRP54_N superfamily SRP54-type protein, helical bundle domain; SRP54-type protein, helical bundle domain. - 56.4056 4.41E-10 10 - 98 superfamily 261873
SRP54_euk signal recognition particle protein SRP54; This model represents examples from the eukaryotic... - 519.008 0 2 - 446 multi-dom 130492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
260805 Not available 252416 297080 455543 Cre13.g569200.t1.2 AT1G48900.1 360478

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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