PHATRDRAFT_14143 transcription factor cmyb isoform 1 (SANT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14143	chr_13	transcription factor cmyb isoform 1 (SANT)	183108	183413	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0394

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0135	0.29	3000 1200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	36.3994	5.93E-05	54 - 95	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	36.3994	5.93E-05	54 - 95	superfamily	266586
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	36.3994	5.93E-05	54 - 95	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	36.3994	5.93E-05	54 - 95	superfamily	266586

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23915		Not available	154052	152047	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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