PHATRDRAFT_14646 beta-ig-h3 fasciclin (COG2335)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14646	chr_15	beta-ig-h3 fasciclin (COG2335)	735461	735889	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0384

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0145	0.28	5.4 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fasciclin		Fasciclin domain; This extracellular domain is found repeated four times in grasshopper fasciclin I...	cl02663	123.906	1.20E-36	11 - 139	specific	251315
Fasciclin superfamily		Fasciclin domain; This extracellular domain is found repeated four times in grasshopper fasciclin I...	-	123.906	1.20E-36	11 - 139	superfamily	261399
COG2335		Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer...	-	138.673	1.36E-41	3 - 142	multi-dom	225214

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	163177	300794	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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