PHATRDRAFT_1494 hcf101 (high-chlorophyll-fluorescence 101) atp binding (MRP-like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1494 chr_3 hcf101 (high-chlorophyll-fluorescence 101) atp binding (MRP-like) 874173 875645 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0180

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0015
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the... cl17203 235.437 2.09E-75 92 - 294 specific 238994
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 235.437 2.09E-75 92 - 294 superfamily 266552
DUF59 Domain of unknown function DUF59; This family has an alpha/beta topology, with 13 conserved... cl00941 76.4712 2.13E-17 1 - 70 specific 250939
DUF59 superfamily Domain of unknown function DUF59; This family has an alpha/beta topology, with 13 conserved... - 76.4712 2.13E-17 1 - 70 superfamily 260711
DUF971 superfamily Protein of unknown function (DUF971); This family consists of several short bacterial proteins and... - 63.7452 1.15E-12 345 - 432 superfamily 260928
Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] - 65.2331 2.63E-12 92 - 334 multi-dom 224113

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37534 Not available 197191 303728 70127 Cre01.g045902.t1.1 AT3G24430.1 471037

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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