PHATRDRAFT_14998 abc transporter family protein (Uup)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14998 chr_17 abc transporter family protein (Uup) 71943 73889 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0440

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 140.276 3.44E-39 44 - 289 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 140.276 3.44E-39 44 - 289 superfamily 266551
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 140.276 3.44E-39 44 - 289 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 140.276 3.44E-39 44 - 289 superfamily 266551
ABC_tran_2 superfamily ABC transporter; This domain is related to pfam00005. - 50.2684 7.62E-08 285 - 373 superfamily 257346
ABC_tran_2 superfamily ABC transporter; This domain is related to pfam00005. - 50.2684 7.62E-08 285 - 373 superfamily 257346
Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction... - 425.896 1.82E-142 57 - 580 multi-dom 223562

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262254 Not available 197602 200235 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments