PHATRDRAFT_15016 transcription factor c-myb (SANT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15016	chr_17	transcription factor c-myb (SANT)	115385	115832	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0067	0.34	150 810

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	46.4146	2.42E-08	70 - 110	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	31.9104	0.00570958	2 - 27	superfamily	266586
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	46.4146	2.42E-08	70 - 110	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	31.9104	0.00570958	2 - 27	superfamily	266586
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	31.9104	0.00570958	2 - 27	superfamily	266586

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264853		Not available	199622	208412	430959	Not available	AT5G02320.2	350123

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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