PHATRDRAFT_15186 ac007980_9cytosolic trna-ala synthetase (PLN02900)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15186 chr_18 ac007980_9cytosolic trna-ala synthetase (PLN02900) 78387 81266 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0134

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0201
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AlaRS_core Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is... cl00268 377.856 8.33E-124 10 - 257 specific 238360
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 377.856 8.33E-124 10 - 257 superfamily 260313
tRNA_SAD superfamily Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of... - 75.5046 3.55E-15 530 - 742 superfamily 263673
PLN02900 alanyl-tRNA synthetase - 1455.6 0 1 - 952 multi-dom 215487

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38248 Not available 206558 222122 Not available Not available AT1G50200.1 473521

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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