PHATRDRAFT_16018 small gtp-binding protein domain (LepA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_16018 chr_22 small gtp-binding protein domain (LepA) 494472 496699 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0255

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 190.437 2.25E-56 11 - 221 superfamily 266525
LepA_C superfamily GTP-binding protein LepA C-terminus; This family consists of the C-terminal region of several pro-... - 151.593 1.90E-43 553 - 664 superfamily 203441
LepA_C superfamily GTP-binding protein LepA C-terminus; This family consists of the C-terminal region of several pro-... - 151.593 1.90E-43 553 - 664 superfamily 203441
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 79.8434 4.37E-18 464 - 538 superfamily 261447
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 76.724 7.33E-17 231 - 314 superfamily 261449
LepA Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] - 530.218 0 5 - 664 multi-dom 223557

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
31665 Not available 209620 213147 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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