PHATRDRAFT_16786 shd atp binding (PRK05218)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16786	chr_28	shd atp binding (PRK05218)	254544	256691	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0101

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0060	0.37	0.000026 120

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HATPase_c		Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:...	cl00075	51.4934	4.34E-08	34 - 152	specific	238030
HATPase_c superfamily		Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:...	-	51.4934	4.34E-08	34 - 152	superfamily	260175
HSP90 superfamily		Hsp90 protein; Hsp90 protein.	-	430.729	1.40E-142	195 - 716	superfamily	249661
PRK05218		heat shock protein 90; Provisional	-	597.479	0	8 - 716	multi-dom	235366

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22766		Not available	259629	324747	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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