PHATRDRAFT_17772 (PLN03206)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17772 chr_1 (PLN03206) 1858805 1862899 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat. FGAR... cl10019 366.412 7.47E-116 222 - 616 specific 100034
PurM-like superfamily AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen... - 247.449 7.89E-74 697 - 970 superfamily 263946
GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide... cl00020 311.857 3.12E-97 1052 - 1307 specific 153211
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 311.857 3.12E-97 1052 - 1307 superfamily 260141
PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat.... cl10019 247.449 7.89E-74 697 - 970 specific 100035
PurM-like superfamily AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen... - 247.449 7.89E-74 697 - 970 superfamily 263946
PLN03206 phosphoribosylformylglycinamidine synthase; Provisional - 2486.15 0 19 - 1311 multi-dom 178745

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30301 Not available 275387 5808 456050 Cre08.g364800.t1.2 AT1G74260.1 544320

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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