PHATRDRAFT_18524 threonyl-trna synthetase (PLN02908)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18524 chr_3 threonyl-trna synthetase (PLN02908) 414363 417103 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0127
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is... cl00268 478.198 1.07E-163 367 - 669 specific 238394
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 478.198 1.07E-163 367 - 669 superfamily 260313
ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS... cl00266 115.679 2.65E-30 669 - 759 specific 238437
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 115.679 2.65E-30 669 - 759 superfamily 260312
TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples... cl15768 60.5934 2.04E-11 119 - 188 specific 133437
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 60.5934 2.04E-11 119 - 188 superfamily 265779
tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of... cl08469 54.007 2.72E-09 296 - 344 specific 254556
tRNA_SAD superfamily Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of... - 54.007 2.72E-09 296 - 344 superfamily 263673
PLN02908 threonyl-tRNA synthetase - 1272.01 0 68 - 766 multi-dom 178496

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22770 Not available 231803 261982 74837 Cre06.g273300.t1.2 AT5G26830.1 551631

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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