PHATRDRAFT_18693 (ABCC_MRP_domain2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18693 chr_3 (ABCC_MRP_domain2) 995732 1000075 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0491

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0037
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain2 ATP-binding cassette domain 2 of multidrug resistance-associated protein; The ABC subfamily C is... cl17201 329.069 1.50E-103 1086 - 1310 specific 213211
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 198.847 2.04E-57 381 - 604 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 198.847 2.04E-57 381 - 604 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 81.9556 6.78E-17 808 - 1041 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 81.9556 6.78E-17 808 - 1041 superfamily 250039
CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [... - 186.699 9.39E-50 811 - 1329 multi-dom 227321
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 162.213 1.12E-41 40 - 629 multi-dom 224055

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 14958 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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