PHATRDRAFT_19025 ribosomal proteincytosolic (PTZ00027)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19025	chr_4	ribosomal proteincytosolic (PTZ00027)	732792	733503	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0133	0.27	7.9 370

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_L6 superfamily		Ribosomal protein L6; Ribosomal protein L6.	-	37.1608	0.000275866	12 - 102	superfamily	249789
Ribosomal_L6 superfamily		Ribosomal protein L6; Ribosomal protein L6.	-	37.1608	0.000275866	12 - 102	superfamily	249789
Ribosomal_L6 superfamily		Ribosomal protein L6; Ribosomal protein L6.	-	37.1608	0.000275866	12 - 102	superfamily	249789
Ribosomal_L6 superfamily		Ribosomal protein L6; Ribosomal protein L6.	-	37.1608	0.000275866	12 - 102	superfamily	249789
PTZ00027		60S ribosomal protein L6; Provisional	-	229.27	5.02E-76	1 - 198	multi-dom	240234

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26137		Not available	267744	300093	351730	Cre12.g494050.t1.2	AT4G10450.1	353463

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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