PHATRDRAFT_19333 fas2 (fasciata 2) nucleotide binding (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19333	chr_5	fas2 (fasciata 2) nucleotide binding (WD40 superfamily)	321582	323190	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0044	0.37	0.52 2200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	76.99	4.14E-16	65 - 222	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	60.1023	4.06E-10	65 - 222	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2085		Not available	139283	287654	221726	Not available	AT5G64630.1	469749

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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