PHATRDRAFT_19568 ruvbl1 protein (TIP49)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19568 chr_6 ruvbl1 protein (TIP49) 104001 105503 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0124
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 48.6815 3.53E-07 74 - 146 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 48.6815 3.53E-07 74 - 146 superfamily 267297
Trp_repressor superfamily Trp repressor protein; This protein binds to tryptophan and represses transcription of the Trp... - 35.1784 0.00555465 127 - 202 superfamily 247820
TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] - 579.307 0 25 - 484 multi-dom 224145

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24527 Not available 267190 324213 Not available Cre09.g414050.t1.2 AT5G22330.1 552012

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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