PHATRDRAFT_20183 at5g50850 k16e14_1 (PLN02683)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20183 chr_8 at5g50850 k16e14_1 (PLN02683) 120367 121599 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0112

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0229
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate... cl11410 302.09 1.87E-102 34 - 200 specific 132919
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 302.09 1.87E-102 34 - 200 superfamily 264357
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 143.511 1.04E-41 224 - 342 superfamily 251527
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 143.511 1.04E-41 224 - 342 superfamily 251527
PLN02683 pyruvate dehydrogenase E1 component subunit beta - 623.765 0 1 - 360 multi-dom 215368

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8778 Not available 225175 218384 444048 Cre16.g677026.t1.1 AT5G50850.1 284579

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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