PHATRDRAFT_21046 cycloartenol synthase (squalene_cyclas)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21046	chr_11	cycloartenol synthase (squalene_cyclas)	286132	288248	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0081

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SQCY_1		Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6...	cl08267	714.357	0	2 - 667	specific	239222
ISOPREN_C2_like superfamily		This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly...	-	714.357	0	2 - 667	superfamily	263556
squalene_cyclas		squalene/oxidosqualene cyclases; This family of enzymes catalyzes the cyclization of the...	-	594.805	0	2 - 670	multi-dom	233578

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
277		Not available	210476	303195	458646	Cre01.g011100.t1.2	AT2G07050.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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