PHATRDRAFT_2182 gtp-binding family protein (Nucleostemin_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_2182 chr_2 gtp-binding family protein (Nucleostemin_like) 862460 863635 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0102
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nucleostemin_like A circularly permuted subfamily of the Ras GTPases; Nucleostemin (NS) is a nucleolar protein that... cl17249 235.933 1.44E-76 96 - 263 specific 206753
YlqF_related_GTPase superfamily Circularly permuted YlqF-related GTPases; These proteins are found in bacteria, eukaryotes, and... - 235.933 1.44E-76 96 - 263 superfamily 247803
GN3L_Grn1 superfamily GNL3L/Grn1 putative GTPase; Grn1 (yeast) and GNL3L (human) are putative GTPases which are required... - 52.6455 3.94E-09 7 - 47 superfamily 254983
GN3L_Grn1 superfamily GNL3L/Grn1 putative GTPase; Grn1 (yeast) and GNL3L (human) are putative GTPases which are required... - 52.6455 3.94E-09 7 - 47 superfamily 254983
GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF; Members of this protein family are GTP-binding... - 119.92 2.58E-31 85 - 352 multi-dom 213833

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40985 Not available 170214 163793 Not available Cre12.g533050.t1.2 AT3G07050.1 498057

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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