PHATRDRAFT_21873 peptide chain release factor 2 (prfB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21873 chr_14 peptide chain release factor 2 (prfB) 661654 662937 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0127

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0046
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RF-1 RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... cl17422 151.952 1.41E-44 258 - 366 specific 249886
RF-1 superfamily RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... - 151.952 1.41E-44 258 - 366 superfamily 266672
PCRF This domain is found in peptide chain release factors; This domain is found in peptide chain... cl17745 116.408 1.49E-31 112 - 217 specific 214923
PCRF superfamily PCRF domain; This domain is found in peptide chain release factors. - 116.408 1.49E-31 112 - 217 superfamily 266807
prfB peptide chain release factor 2; Validated - 401.184 1.20E-137 36 - 398 multi-dom 234799

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34785 Not available 178602 283076 73530 Cre01.g010864.t1.1 AT5G36170.2 501483

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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