PHATRDRAFT_21988 (PRK09279)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21988 chr_15 (PRK09279) 327886 331010 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0401

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0019
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PEP-utilizers_C superfamily PEP-utilizing enzyme, TIM barrel domain; PEP-utilizing enzyme, TIM barrel domain. - 284.94 1.03E-87 626 - 986 superfamily 251603
PPDK_N superfamily Pyruvate phosphate dikinase, PEP/pyruvate binding domain; This enzyme catalyses the reversible... - 149.52 2.72E-39 124 - 463 superfamily 250534
PPDK_N superfamily Pyruvate phosphate dikinase, PEP/pyruvate binding domain; This enzyme catalyses the reversible... - 149.52 2.72E-39 124 - 463 superfamily 250534
PEP-utilizers PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/... cl17700 84.5464 1.93E-19 530 - 613 specific 249825
PEP-utilizers superfamily PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/... - 84.5464 1.93E-19 530 - 613 superfamily 266778
PRK09279 pyruvate phosphate dikinase; Provisional - 1407.94 0 114 - 992 multi-dom 236446

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
5500 Not available 252182 15632 Not available Cre10.g424750.t1.2 AT4G15530.3 477481

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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