PHATRDRAFT_22187 glycine dehydrogenase (PLN02414)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_22187 chr_16 glycine dehydrogenase (PLN02414) 205248 208623 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0480

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0036
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine... cl18945 432.426 9.45E-142 512 - 911 specific 99737
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 432.426 9.45E-142 512 - 911 superfamily 267298
GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine... cl18945 432.426 9.45E-142 512 - 911 specific 99737
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 432.426 9.45E-142 512 - 911 superfamily 267298
PLN02414 glycine dehydrogenase (decarboxylating) - 1777.38 0 1 - 1005 multi-dom 178035

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39799 Not available 276117 317976 Not available Cre12.g534800.t1.1 AT4G33010.2 495458

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments