PHATRDRAFT_22896 (ArsA_ATPase)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22896	chr_20	(ArsA_ATPase)	211230	212458	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0114

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0120	0.36	4800 5800

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ArsA		ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven...	cl17203	197.854	2.56E-61	37 - 319	specific	238992
Fer4_NifH superfamily		The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain....	-	197.854	2.56E-61	37 - 319	superfamily	266552
ArsA_ATPase		Anion-transporting ATPase; This Pfam family represents a conserved domain, which is sometimes...	-	317.374	1.17E-106	37 - 343	multi-dom	251258

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39841		Not available	276873	68043	Not available	Cre03.g204800.t1.2	AT1G01910.4	563420

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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