PHATRDRAFT_22909 ll-diaminopimelate aminotransferase (COG0436)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22909	chr_20	ll-diaminopimelate aminotransferase (COG0436)	274090	275486	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0134

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0093	0.28	1100 560000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_like		Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent...	cl18945	223.372	2.11E-68	74 - 440	specific	99734
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	223.372	2.11E-68	74 - 440	superfamily	267298
COG0436		Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]	-	242.566	3.01E-75	43 - 442	multi-dom	223513

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31394		Not available	273803	318330	456646	Cre17.g734200.t1.2	AT2G13810.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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