PHATRDRAFT_23077 wdr5 protein (WD40)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23077	chr_21	wdr5 protein (WD40)	395986	397125	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0050

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	221.055	4.89E-69	40 - 362	superfamily	238121
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	221.055	4.89E-69	40 - 362	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	142.92	4.28E-38	40 - 361	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36367		Not available	226355	94737	416720	Cre08.g367650.t1.2	AT3G49660.1	252422

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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