PHATRDRAFT_23547 bifunctional aminoacyl-trna prolyl-trna (PRK08661)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23547 chr_25 bifunctional aminoacyl-trna prolyl-trna (PRK08661) 78253 79692 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0129

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0077
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is... cl00268 438.953 5.02E-153 1 - 248 specific 238401
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 438.953 5.02E-153 1 - 248 superfamily 260313
ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea.... cl00266 218.321 6.47E-68 254 - 479 specific 238439
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 218.321 6.47E-68 254 - 479 superfamily 260312
PRK08661 prolyl-tRNA synthetase; Provisional - 641.031 0 1 - 479 multi-dom 236327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264365 Not available 177051 205659 244659 Cre10.g429100.t1.2 AT3G62120.2 557759

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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