PHATRDRAFT_25769 delta 12 fatty acid desaturase (Delta12-FADS-like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_25769 chr_3 delta 12 fatty acid desaturase (Delta12-FADS-like) 836904 838214 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0494

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0012
 0.51

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes,... cl00615 224.412 1.82E-70 62 - 372 specific 239584
Membrane-FADS-like superfamily The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane... - 224.412 1.82E-70 62 - 372 superfamily 260534
DesA Fatty acid desaturase [Lipid metabolism] - 126.051 1.19E-32 51 - 424 multi-dom 225779

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23798 Not available 277802 261990 Not available Cre17.g711150.t1.2 AT3G12120.2 264618

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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