PHATRDRAFT_26775 (VacB)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_26775	chr_6	(VacB)	346405	348183	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0044

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNB		RNB domain; This domain is the catalytic domain of ribonuclease II.	cl19762	326.947	8.91E-107	87 - 447	specific	250123
RNB superfamily		RNB domain; This domain is the catalytic domain of ribonuclease II.	-	326.947	8.91E-107	87 - 447	superfamily	268115
VacB		Exoribonuclease R [Transcription]	-	360.168	1.06E-114	12 - 524	multi-dom	223631

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
12859		Not available	204984	178610	Not available	Cre03.g208100.t1.1	AT1G77680.1	472843

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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