PHATRDRAFT_31433 abc transporter family protein (3a01204)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31433	chr_1	abc transporter family protein (3a01204)	87697	89869	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0355

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0100	0.43	0.00031 180000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABCG_EPDR		Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily;...	cl17201	226.664	8.81E-70	50 - 283	specific	213180
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	226.664	8.81E-70	50 - 283	superfamily	266551
ABC2_membrane		ABC-2 type transporter; ABC-2 type transporter.	cl17235	143.937	1.81E-39	371 - 583	specific	250332
ABC2_membrane superfamily		ABC-2 type transporter; ABC-2 type transporter.	-	143.937	1.81E-39	371 - 583	superfamily	266576
3a01204		The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other].	-	400.577	1.15E-130	66 - 637	multi-dom	233207

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	137656	295043	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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