PHATRDRAFT_32786 kelch repeat-containing protein (PLN02193)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_32786 chr_2 kelch repeat-containing protein (PLN02193) 802486 804468 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0086
 0.15

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Kelch_1 Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six... cl02701 43.0371 1.46E-05 492 - 531 specific 250548
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 38.3896 0.00066131 323 - 368 superfamily 261412
Kelch_4 Galactose oxidase, central domain; Galactose oxidase, central domain. cl02701 38.3896 0.00066131 323 - 368 specific 257743
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 38.3896 0.00066131 323 - 368 superfamily 261412
PLN02193 nitrile-specifier protein - 66.1323 9.66E-12 395 - 645 multi-dom 177844
DUF3295 Protein of unknown function (DUF3295); This family is conserved in fungi but the function is not... - 41.1092 0.000765596 52 - 321 multi-dom 256557

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23054 Not available 241823 209512 Not available Not available Not available 317965

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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