PHATRDRAFT_33458 (Trp-synth-beta_II superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_33458	chr_3	(Trp-synth-beta_II superfamily)	964109	965395	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0267

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0019	0.43	550 930

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trp-synth-beta_II superfamily		Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-...	-	88.9504	4.59E-20	70 - 412	superfamily	260370

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2455		Not available	271877	251633	201543	Not available	Not available	485952

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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