PHATRDRAFT_33661 tetratricopeptide repeat domain 28
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33661 chr_4 tetratricopeptide repeat domain 28 39238 40284 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0089

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 37.7448 0.00059848 250 - 313 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 37.7448 0.00059848 250 - 313 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 37.7448 0.00059848 250 - 313 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 37.7448 0.00059848 250 - 313 superfamily 238112
Paramyxo_ncap superfamily Paramyxovirus nucleocapsid protein; The nucleocapsid protein is referred to as NP. NP is is the... - 44.0469 3.52E-05 32 - 152 superfamily 144532
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 39.6678 0.000101085 169 - 239 multi-dom 257749
TPR_11 TPR repeat; TPR repeat. - 36.9079 0.000866258 250 - 321 multi-dom 257739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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