PHATRDRAFT_33947 gtp pyrophosphokinase (SpoT)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33947 chr_4 gtp pyrophosphokinase (SpoT) 730298 732508 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0404

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0040
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_Rel-Spo_like Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; This... cl11966 88.5582 1.71E-20 459 - 597 specific 143389
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 88.5582 1.71E-20 459 - 597 superfamily 264491
HD_4 superfamily HD domain; HD domains are metal dependent phosphohydrolases. - 50.0503 2.06E-07 296 - 397 superfamily 257658
HD_4 superfamily HD domain; HD domains are metal dependent phosphohydrolases. - 50.0503 2.06E-07 296 - 397 superfamily 257658
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 35.5444 0.00627318 684 - 736 superfamily 265779
SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms /... - 162.42 2.74E-42 328 - 731 multi-dom 223394

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261615 Not available 160688 178926 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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